Table 1.
Statistics characterizing TM7a assembly and annotation, derived from IMG/M
| Item | No. | % of total |
|---|---|---|
| DNA bases | ||
| Total | 2,864,887 | 100.0 |
| Coding | 1,160,954 | 40.5 |
| G + C | 981,862 | 34.3 |
| DNA scaffolds | 1,825 | 100.0 |
| Genes | ||
| Total | 3,245 | 100.0 |
| Protein coding | 3,160 | 97.4 |
| With function prediction | 1,389 | 42.8 |
| Without function prediction | 1,771 | 54.6 |
| Assigned to enzymes | 530 | 16.3 |
| Connected to KEGG pathways | 400 | 12.3 |
| Not connected to KEGG pathways | 2,760 | 85.1 |
| In clusters of orthologous groups | 1,422 | 43.8 |
| In protein families | 1,221 | 37.6 |
KEGG, Kyoto Encyclopedia of Genes and Genomes (www.genome.jp/kegg).