Figure 1.
mVISTA nucleotide alignment comparing the SA11‐H96 genome with those of other SA11‐derivative strains (A) and other non‐related strains (B). Percentage (right y‐axes) indicates sequence identity, and shading indicates level of conservation. In A, the number of nucleotide changes (amino acid changes) are indicated below each gene. Comparisons of the VP4 and NSP2 genes of the O agent with SA11 strains are also shown. GenBank accession numbers for the genome of SA11‐Both (SA11‐B) (see Table 2); lapine 30/96, DQ205221‐DQ205231; human B4106, AY740731‐AY740741; bovine RF, J04346, X14057, AY116592, U65924, M22308, K02254, Z21639, Z21640, X65940, AY116593, AF188126; bovine UK, X55444, X52589, AY300923, M22306, L11575, X53667, K02170, J02420, X00896, K03384, K03385; human KU, AB022765‐AB022773, AB222784, D16343; human TB‐Chen, AY787644‐AY787654; avian PO‐13, AB009625‐AB009633, D16329, D82979; and group C Bristol, NC007543‐NC007547, 007569‐007574. Accession numbers for gene 5 of SA11 strains (see Table 2).