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. 2007 May 4;93(4):1134–1150. doi: 10.1529/biophysj.106.097162

TABLE 2.

Table of parameters

Parameter Description Value Source
kon, khyd Dimer on rate constant; MinE-induced MinD-dimer hydrolysis rate Assumed to be fast relative to other processes.
Inline graphic Background MinD dimer hydrolysis rate khyd/10 Hu et al. (11).
kdep E-ring-induced MinD hydrolysis rate 80 s−1 Estimated from Hale et al. (13).
kpoly MinD polymerization rate constant 100 μM−1 s−1 Estimated from Hale et al. (13).
Inline graphic E-ring elongation rate constant 160 μM−1 s−1 Estimated from Hale et al. (13).
knuc MinD polymer nucleation rate constant 0.001–0.1 μM−3 s−1 Tested range; see text.
kcap E-ring initiation rate constant 0.06–1.5 μM−3 s−1 Tested range; see text.
KE MinE dimer dissociation constant 0.6 μM Zhang et al. (36).
Dtot Total MinD concentration 4 μM Estimated from Shih et al. (24) and de Boer et al. (35).
Etot Total MinE concentration 3 μM Estimated from Shih et al. (24).
Dthresh Threshold MinD concentration 1.5–3 μM Hu et al. (11).
Ethresh Threshold MinE concentration 2.5 μM Fitted parameter; see text.
δ Half MinD monomer length 2.5 nm Suefuji et al. (25).
L, r, V Cell length, radius, volume 3 μm, 3/8 μm, 1.3 μm3 Approximate dimensions.
Ap, Am Polar and nonpolar surface areas 1 μm2, 10 μm2 Approximate dimensions.
θ MinD helix pitch angle 80° Estimated from Shih et al. (9).
λ Phage expression level 3.3 μM Fitted parameter; see text.

Parameters used in the deterministic and stochastic versions of the model. A more detailed discussion of parameter values is provided in the Appendix.