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. 2007 Apr 27;93(4):1215–1223. doi: 10.1529/biophysj.106.100511

TABLE 1.

Four molecular force balances are depicted each comprising an amino-oligo (top), a Cy3-oligo (middle), and a biotin-oligo (bottom)

Dir. Duplex No. Sequence
3′-5′ 30PM #66 NH2-20t-CTGCAGGAATTCGATATCAAGCTTATCGAT
5′-3′ #74 GACGTCCTTAAGCTATAGTTCGAATAGCTAc-17t-cATCGATAAGCTTGATATCGAATTCCTGCAGttttt-Cy3
3′-5′ 30PM #62 TAGCTATTCGAACTATAGCTTAAGGACGTC-20*t-Biotin
3′-5′ 30GG #66 NH2-20t-CTGCAGGAATTCGATATCAAGCTTATCGAT
5′-3′ #75 GACGTCCTTAAGGTATAGTTCGAATAGCTAc-17t-cATCGATAAGCTTGATATCGAATTCCTGCAGttttt-Cy3
3′-5′ 30PM #62 TAGCTATTCGAACTATAGCTTAAGGACGTC-20*t-Biotin
3′-5′ 30CC #66 NH2-20t-CTGCAGGAATTCGATATCAAGCTTATCGAT
5′-3′ #80 GACGTCCTTAACCTATAGTTCGAATAGCTAc-17t-cATCGATAAGCTTGATATCGAATTCCTGCAGttttt-Cy3
3′-5′ 30PM #62 TAGCTATTCGAACTATAGCTTAAGGACGTC-20*t-Biotin
3′-5′ 29CC #66 NH2-20t-CTGCAGGAATTCGATATCAAGCTTATCGAT
5′-3′ #86 _ACGTCCTTAACCTATAGTTCGAATAGCTAc-17t-cATCGATAAGCTTGATATCGAATTCCTGCAGttttt-Cy3
3′-5′ 30PM #62 TAGCTATTCGAACTATAGCTTAAGGACGTC-20*t-Biotin

Amino- and biotin-oligos are identical in all balances. Mutations are only introduced by single nucleotide exchanges (30GG, 30CC, 29CC) and a single nucleotide deletion (29CC) in the Cy3-oligonucleotides (underlined bases).