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. 2007 Jul;176(3):1403–1415. doi: 10.1534/genetics.107.071621

TABLE 1.

DNA repair genes included in this study

S. pombe gene S. cerevisiae closest homolog Function in S. pombe
lig4+ DNL4 ATP-dependent DNA ligase involved in NHEJ (Baumann and Cech 2000)
pku70+ YKU70 DNA-binding protein involved in DNA repair and telomere maintenance (Baumann and Cech 2000)
exo1+ EXO1 5′ → 3′ exonuclease (XP-G family) involved in several DNA repair pathways such as MMR (Rudolph et al. 1998) and possibly HR (Tomita et al. 2003)
rad2+ RAD27 ssDNA endonuclease (XP-G family) homologous to FEN-1; involved in mismatched DNA repair (Kunz and Fleck 2001) and telomere maintenance (Dahlen et al. 2003)
rad13+ RAD2 ssDNA endonuclease (XP-G family) involved in NER (Kunz and Fleck 2001)
spac12g12.16c+ RAD27 Member of the XP-G family of nucleases with unknown function
rad22+ RAD52 Annealing of complementary single-stranded DNA; required for HR (Hegde et al. 1996; van den Bosch et al. 2001, 2002)
rhp51+ RAD51 AAA ATPase with strand displacement activity involved in HR and telomere maintenance (Kibe et al. 2003)
rqh1+ SGS1 DEAD/DEAH box DNA helicase (RecQ family) involved in HR-dependent DSB repair (Hegde et al. 1996)
msh2+ MSH2 DNA mismatch repair protein (MutS homolog) required for MMR (Rudolph et al. 1998)
pms1+ PMS1 DNA mismatch repair protein (MutL homolog) required for MMR (Rudolph et al. 1998)
swi10+ RAD10 ssDNA repair endonuclease (ERCC1 family); forms a complex with Rad16 and is involved in NER (Carr et al. 1994; Rodel et al. 1997)
rad16+ RAD1 ssDNA repair endonuclease (XP-F family); forms a complex with Swi10 and is involved in NER (Carr et al. 1994; Rodel et al. 1997)
pol4+ POL4 PolX DNA polymerase with gap-filling activity; combines properties of mammalian DNA polymerase β, μ, and λ; possibly involved in BER and NHEJ (Gonzalez-Barrera et al. 2005)
rad50+ RAD50 AAA ATPase involved in sister-chromatid recombination (Hartsuiker et al. 2001) and intermolecular NHEJ (Decottignies 2005)