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. 2007 Mar 30;73(11):3460–3469. doi: 10.1128/AEM.01751-06

TABLE 2.

Properties of three sequence tags and their associated candidate (partial) genes

Sequence tag Recombinant plasmid Insert size (bp) Associated gene(s)a Protein homolog(s) (accession no.) Domain organizationb Protein classification Signature motif(s) or substrate specificity Predicted substrate specificity Necessary for FK228 biosynthesis
P3-A6-SP6 pP3-A6 2,826 NNc JamL (AAS98783) KS-ATi Type I PKS QTRTAQ, GHSYG, and AAFH in AT domain MCoA No
P4-B4-SP6 pP4-B4 3,612 depD BmyB (CAE11249) Ci-A-PCP-E Type A NRPS DLFEMSLIWK in A domain l-Cys Yes
P4-G7-SP6 pP4-G7 2,599 depC, depD AmphI (AAK73501), NosC (AAF17280) KRi-ACP, C-Ai PKS, NRPS NAd NA Yes
a

See Fig. 2.

b

A superscript i indicates incomplete. KS, β-ketoacyl synthase; E, epimerase.

c

NN, not named.

d

NA, not available.