TABLE 1.

High-expression genes in strain 168 cells grown on RG-I compared to glucose

ORF name	Gene	Change (fold)a	Pb	Functional class
BSU06970	yesO	9.0	0.0086	Probable multiple-sugar transport system substrate-binding protein
BSU06980c	yesP	4.0	0.67	Probable multiple-sugar transport system permease protein
BSU06990	yesQ	6.2	0.0067	Probable multiple-sugar transport system permease protein
BSU07000c	yesR	4.0	0.30	Unknown
BSU07010	yesS	6.6	0.00019	Probable transcriptional regulator (AraC/XylS family)
BSU07020c	yesT	3.1	0.56	Similar to RG acetylesterase
BSU07030c	yesU	3.6	1	Unknown
BSU07040c	yesV	3.9	1	Unknown
BSU07050	yesW	3.1	0.030	RG lyase
BSU07060	yesX	5.2	0.0031	RG lyase
BSU07070	yesY	14.6	9.72E−06	Similar to RG acetylesterase
BSU07080	yesZ	9.7	0.0087	Probable β-galactosidase
BSU30100	yteT	7.5	0.023	Putative oxidoreductase
BSU30110	yteS	11.5	0.00015	Unknown
BSU30120	yteR	7.5	0.024	Unknown
BSU30130	yteQ	10.1	0.00017	Putative multiple-sugar transport system permease protein
BSU30140	yteP	15.3	3.17E−06	Putative multiple-sugar transport system permease protein
BSU01900	ybcM	32.0	1.35E−08	Similar to glucosamine-fructose-6-phosphate aminotransferase
BSU01910	ybcO	9.7	4.06E−06	Probable cell killing factor precursor
BSU01920	ybcP	28.9	1.74E−08	Cell killing factor production, similar to coenzyme PPQ synthesis protein
BSU01930	ybcS	16.9	0.00085	Unknown
BSU01940	ybcT	25.4	1.46E−08	Cell killing factor production, probable membrane-bound metalloprotease
BSU01950	ybdA	10.7	0.0016	Exporter of cell killing factor, ABC transport system ATP-binding protein
BSU01960	ybdB	10.4	0.00044	Exporter of cell killing factor, ABC transport system permease protein
BSU01970c	ybdD	6.0	0.44	Unknown
BSU01980	ybdE	8.7	0.00026	Unknown

^aChanges (fold) are defined as the expression of growth conditions in the presence or absence of RG-I.

^bP after Student's t test and with Bonferroni adjustment.

^cGene for which the P value was higher than the cutoff (0.05).