TABLE 2.
ORF analysis of pDOJ1 from Lactobacillus delbrueckii subsp. bulgaricus
| ORF | Function | Position (sizea) | MWb | pIc | % Identityd | Best BLAST match | GenBank accession no. |
|---|---|---|---|---|---|---|---|
| ORF1 | Mobilization | 278-856 (192) | 21,833 | 9.25 | 97 over 192 aa | Putative mobilization protein (ORFB) of pLBB2, L. delbrueckii | NC_002191 |
| ORF2 | Transposase | 1,157-1,678 (173) | 19,475 | 6.62 | 98 over 171 aa | Hypothetical protein (ORF5) of pN42, L. delbrueckii | NC_004850 |
| ORF3 | Unknown | 2,333-2,527 (64) | 7,059 | 9.53 | 94 over 39 aa | Hypothetical protein (ORFA) of pLL1212, L. delbrueckii | NC_004937 |
| ORF4 | Unknown | 2,527-2,754 (75) | 8,708 | 5.00 | 94 over 75 aa | Hypothetical protein (ORFB) of pLL1212, L. delbrueckii | NC_004937 |
| ORF5 | Unknown | 2,769-3,740 (323) | 36,326 | 9.51 | 85 over 323 aa | Hypothetical protein (ORF3) of pN42, L. delbrueckii | NC_004850 |
| ORF6 | Primase-helicase | 4,035-6,101 (688) | 78,068 | 6.31 | 90 over 687 aa | Primase-helicase (ORFA) of pLBB2, L. delbrueckii | NC_002191 |
a
Number of amino acids.
b
MW, molecular weight.
c
pI, predicted isoelectric point.
d
Amino acid (aa) sequence identity.