TABLE 2.
HLA-DR binding of overlapping HspX peptidesa
| Amino acids | Sequence | IC50 (μM)
|
||
|---|---|---|---|---|
| HLA−:DR*0101 | DR*1501 | DR*0301 | ||
| 1-20 | MATTLPVQRHPRSLFPEFSE | 15 | 22 | >100 |
| 11-30 | PRSLFPEFSELFAAFPSFAG | <0.7 | <0.7 | 42 |
| 21-40 | LFAAFPSFAGLRPTFDTRLM | 5 | 0.9 | 68 |
| 31-50 | LRPTFDTRLMRLEDEMKEGR | 24 | 35 | 0.5 |
| 41-60 | RLEDEMKEGRYEVRAELPGV | 8 | 13 | 41 |
| 51-70 | YEVRAELPGVDPDKDVDIMV | 12 | 17 | 35 |
| 61-80 | DPDKDVDIMVRDGQLTIKAE | 5 | 3 | 4 |
| 71-90 | RDGQLTIKAERTEQKDFDGR | 14 | 9 | >100 |
| 81-100 | RTEQKDFDGRSEFAYGSFVR | 6 | 1 | >100 |
| 91-110 | SEFAYGSFVRTVSLPVGADE | <0.7 | <0.7 | 45 |
| 101-120 | TVSLPVGADEDDIKATYDKG | >100 | >100 | >100 |
| 111-130 | DDIKATYDKGILTVSVAVSE | >100 | 70 | >100 |
| 121-140 | ILTVSVAVSEGKPTEKHIQI | >100 | >100 | >100 |
| 125-144 | SVAVSEGKPTEKHIQIRSTN | >100 | >100 | >100 |
T-cell epitopes and associated values are depicted in boldface.