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. 2007 Apr 4;45(6):1978–1980. doi: 10.1128/JCM.00563-07

TABLE 1.

Comparison of gene sequences from clinical isolates and reference strains of M. abscessus, M. chelonae, and M. massiliense

Organism No. of isolates found by ITS assay rpoBa
sodAb
hsp65c
No. of isolates % Identity No. of isolates % Identity No. of isolates % Identity
M. abscessus 55 47 100 42 100 44 100
2 99.9 2 99.8
1 99.6
1 99.3
M. chelonae 8 1 100 4 100 6 100
4 99.7 2 99.8 1 99.8
3 99.6 1 99.5 1 98.8
1 98.4
M. massiliense NAd 4 99.3 11 100 11 100
a

rpoB reference sequences under GenBank accession numbers AY147164 for M. abscessus, AY147163 for M. chelonae, and AY593981 M. massiliense.

b

sodA reference sequences under GenBank accession numbers AY458102 for M. abscessus, AY458104 for M. chelonae, and AY593975 for M. massiliense.

c

hsp65 reference sequences under GenBank accession numbers AY498743 for M. abscessus, AY458082 for M. chelonae, and AY596465 for M. massiliense.

d

NA, not applicable.