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. 2007 Jul 10;8:225. doi: 10.1186/1471-2164-8-225

Table 2.

Details of genomes included in EuMicroSatdb

Species Build/Assembly/Ver. Source Web Link
Saccharomyces cerevisiae SGD 1, Nov 2005 Ensembl http://www.ensembl.org
Schizosaccharomyces pombe NCBI release NCBI ftp://ftp.ncbi.nlm.nih.gov
Aspergillus oryzae RIB40 NCBI release NCBI ftp://ftp.ncbi.nlm.nih.gov
Aspergillus fumigatus NCBI release NCBI ftp://ftp.ncbi.nlm.nih.gov
Cryptococcus neoformans varJEC21 NCBI release NCBI ftp://ftp.ncbi.nlm.nih.gov
Encephalitozoon cuniculi NCBI release NCBI ftp://ftp.ncbi.nlm.nih.gov
Eremothecium gossypii NCBI release NCBI ftp://ftp.ncbi.nlm.nih.gov
Candida glabrata CBS138 Genolevures 2 Release 2, May 2006 Genolevures http://cbi.labri.u-bordeaux.fr
Debaryomyces hansenii Genolevures 2 Release 2, May 2006 Genolevures http://cbi.labri.u-bordeaux.fr
Kluyveromyces lactis Genolevures 2 Release 2, May 2006 Genolevures http://cbi.labri.u-bordeaux.fr
Yarrowia lipolytica Genolevures 2 Release 2, May 2006 Genolevures http://cbi.labri.u-bordeaux.fr
Caenorhabditis elegans WS160, July 2006 Ensembl http://www.ensembl.org
Plasmodium falciparum NCBI release NCBI ftp://ftp.ncbi.nlm.nih.gov
Anopheles gambiae AgamP3, Feb 2006 Ensembl http://www.ensembl.org
Drosophila melanogaster BDGP 4.3, July 2005 Ensembl http://www.ensembl.org
Apis mellifera NCBI release NCBI ftp://ftp.ncbi.nlm.nih.gov
Tribolium castaneum NCBI release NCBI ftp://ftp.ncbi.nlm.nih.gov
Oryza sativa ssp.japonica Build 4.0 IRGSP http://rgp.dna.affrc.go.jp/IRGSP/
Oryza sativa ssp. indica 2003-08-01 BGI BGI http://rise.genomics.org.cn
Arabidopsis thaliana ver. Jan 22 2004 TAIR http://www.arabidopsis.org
Ciona intestinalis JGI 2, Mar 2005 Ensembl http://www.ensembl.org
Tetraodon nigroviridis TETRAODON 7, Apr 2003 Ensembl http://www.ensembl.org
Danio rerio Zv6, Mar 2006 Ensembl http://www.ensembl.org
Rattus norvegicus RGSC 3.4, Dec 2004 Ensembl http://www.ensembl.org
Mus musculus NCBI m36, Dec 2005 Ensembl http://www.ensembl.org
Gallus gallus WASHU2, May 2006 Ensembl http://www.ensembl.org
Canis familiaris CanFam 1.0, July 2004 Ensembl http://www.ensembl.org
Macaca mulatta MMUL 1.0, Feb 2006 Ensembl http://www.ensembl.org
Bos taurus Btau_3.1, Aug 2006 Ensembl http://www.ensembl.org
Pan troglodytes PanTro 2.1, Mar 2006 Ensembl http://www.ensembl.org
Homo sapiens NCBI 36, Oct 2005 Ensembl http://www.ensembl.org