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. 2007 Aug;17(8):1210–1218. doi: 10.1101/gr.6281007

Figure 4.

Figure 4.

Association of alternative splicing and genotypes for the CAST gene. (A) RT-PCR of CAST exon against a panel of unrelated parents from each of the 30 HapMap CEU trios. Sample names are colored according to their genotype for SNP rs7724759: homozygous GG (green), homozygous AA (red), and heterozygous AG (black). (B) Four known isoforms of the CAST gene are shown with their RefSeq accession numbers on the left and the candidate probe set shaded in gray. Shown below is the sequence of the exon in capital letters and flanked by the intronic sequence in lower case. The SNP rs7724759 is located at the last position of the exon and is a G to A substitution that disrupts the consensus splice site sequence.

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