Table 1. List of observed haplotypes.
|
Haplotype
|
||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| SNP | B1 | A1 | A2 | A3 | A4 | A5 | A6 | A7 | A8 | A9 | A10 | A11 | C1 | D1 | E1 | F1 | G1 | H1 | H2 | I1 |
| 10 (C/T) | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T |
| 64 (A/C) | A | A | A | A | A | A | A | A | A | C | C | C | C | A | A | A | A | C | C | C |
| 69 (C/A) | C | C | C | C | C | C | C | A | A | C | C | C | C | C | C | C | C | C | C | C |
| 75 (T/C) | T | T | T | T | T | T | T | T | T | C | C | C | C | T | T | T | C | C | C | C |
| E2-60 (T/G) | T | T | T | T | T | T | T | G | G | G | T | T | G | T | T | T | T | G | G | T |
| E2-26 (G/A) | G | G | A | G | G | G | G | A | G | A | A | G | G | G | G | G | G | G | G | G |
| 117 (G/A) | G | G | G | G | G | G | G | A | A | A | G | G | A | G | G | G | A | G | A | A |
| 148 (G/A) | G | G | G | G | G | G | G | G | G | G | G | G | G | G | G | A | A | G | G | G |
| 452 (A/C) | A | A | A | A | A | A | A | A | A | A | A | A | A | C | A | A | A | C | C | C |
| 714 (C/G) | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | G |
| 828 (C/T) | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C |
| 897 (C/T) | C | C | C | C | C | C | C | C | C | T | C | C | C | C | C | C | C | C | C | C |
| 1040 (C/A) | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | A | A |
| 1119 (A/G) | A | A | A | A | A | A | G | G | G | G | G | A | G | A | G | A | G | G | G | G |
| 1142 (A/G) | A | A | A | A | A | A | A | A | A | A | A | A | A | A | G | A | G | A | A | A |
| 1153 (T/C) | T | T | T | T | T | T | T | T | T | C | T | T | T | T | C | T | C | T | T | T |
| 1167 (T/G) | T | T | T | T | T | T | G | G | G | G | G | T | G | T | G | T | G | T | T | T |
| 1279 (C/T) | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C |
| 1521 (A/G) | A | A | A | A | A | A | G | G | G | G | G | A | G | A | G | A | G | G | G | G |
| 1656 (T/C) | C | C | C | C | C | T | T | T | T | T | T | C | C | T | T | T | T | T | T | T |
| 1767 (T/C) | T | T | T | T | T | T | C | C | C | T | T | T | T | T | T | T | T | T | T | T |
| 1827 (T/C) | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | C | C | C |
| 1866 (T/C) | T | T | T | T | T | T | T | T | T | T | T | T | C | T | T | T | T | T | T | T |
| 1875 (C/T) | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | T | T |
| 1947 (G/A) | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | A | A | A |
| 1948 (G/A) | G | G | G | G | G | G | G | G | G | G | G | G | A | G | G | G | G | A | A | A |
| 1992 (C/A) | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | A | A | A |
| 2013 (C/T) | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | T | C | C | C | C |
| 2021 (C/T) | T | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C | C |
| 2028 (T/C) | T | T | T | T | T | T | C | C | C | C | T | T | T | T | T | T | T | T | T | T |
| E3 + 15 (T/C) | T | T | T | C | C | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T |
| E3 + 18 (T/G) | T | T | T | T | G | T | T | T | T | T | T | T | T | T | T | T | T | T | T | T |
| Frequency | 10 | 2 | 18 | 2 | 2 | 28 | 1 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 2 | 1 |