TABLE 1.
Results of subtyping of 55 C. jejuni isolates by MEE, MLST, and PFGE
| Clonal complex | Isolate no. | Sourcea | MEE data
|
MLST data
|
PFGE type | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| ET | Allele profileb | ST | Allele profile
|
||||||||||
| asp | gln | glt | gly | pgm | tkt | unc | |||||||
| ST-48 | D0128 | H (Japan) | 17 | 5.6c.4.4.1.8.6.10.4.2.8 | 48 | 2 | 4 | 1 | 2 | 7 | 1 | 5 | 32 |
| D0132 | H (Japan) | 32 | 7.4.6.4.4.8.7.10.4.2.5 | 48 | 2 | 4 | 1 | 2 | 7 | 1 | 5 | 29 | |
| D1038 | C (United States) | 33 | 7.4.6.4.4.8.7.10.4.2.8 | 48 | 2 | 4 | 1 | 2 | 7 | 1 | 5 | 30 | |
| D2577 | H (Scotland) | 33 | 7.4.6.4.4.8.7.10.4.2.8 | 48 | 2 | 4 | 1 | 2 | 7 | 1 | 5 | 31 | |
| D0424 | H (United States) | 7 | 5.4.6.4.4.8.6.10.3.3.6 | 429 | 7 | 4 | 5 | 2 | 11 | 1 | 5 | 17 | |
| D0603d | H (United States) | 9 | 5.4.6.4.4.8.6.10.4.3.6 | 429 | 7 | 4 | 5 | 2 | 11 | 1 | 5 | 15 | |
| D0835d | C (United States) | 9 | 5.4.6.4.4.8.6.10.4.3.6 | 429 | 7 | 4 | 5 | 2 | 11 | 1 | 5 | 15 | |
| D0712d | H (United States) | 9 | 5.4.6.4.4.8.6.10.4.3.6 | 429 | 7 | 4 | 5 | 2 | 11 | 1 | 5 | 18 | |
| D0941d | GH (United States) | 9 | 5.4.6.4.4.8.6.10.4.3.6 | 429 | 7 | 4 | 5 | 2 | 11 | 1 | 5 | 19 | |
| D0996d | C (United States) | 9 | 5.4.6.4.4.8.6.10.4.3.6 | 429 | 7 | 4 | 5 | 2 | 11 | 1 | 5 | 19 | |
| D0977d | C (United States) | 9 | 5.4.6.4.4.8.6.10.4.3.6 | 429 | 7 | 4 | 5 | 2 | 11 | 1 | 5 | 19 | |
| D1916d | H (United States) | 24 | 5.6.6.4.6.8.6.9.4.2.5 | 429 | 7 | 4 | 5 | 2 | 11 | 1 | 5 | 4 | |
| ST-45 | D0121 | H (Canada) | 14 | 5.5.6.5.4.8.6.2.3.2.5 | 45 | 4 | 7 | 10 | 4 | 1 | 7 | 1 | 37 |
| D2589 | H (Scotland) | 15 | 5.5.6.5.4.8.6.2.5.2.5 | 45 | 4 | 7 | 10 | 4 | 1 | 7 | 1 | 38 | |
| D2583 | H (United States) | 15 | 5.5.6.5.4.8.6.2.5.2.5 | 45 | 4 | 7 | 10 | 4 | 1 | 7 | 1 | 39 | |
| D0125 | H (Canada) | 15 | 5.5.6.5.4.8.6.2.5.2.5 | 45 | 4 | 7 | 10 | 4 | 1 | 7 | 1 | 42 | |
| D0123 | H (Canada) | 13 | 5.5.6.4.4.8.6.2.5.2.5 | 137 | 4 | 7 | 10 | 4 | 42 | 7 | 1 | 34 | |
| D0141 | G (Canada) | 16 | 5.5.8.5.4.8.6.2.5.2.5 | 25 | 4 | 7 | 10 | 1 | 1 | 7 | 1 | 35 | |
| D0131 | H (Canada) | 2 | 5.8e.6.4.4.8.6.2.5.2.5 | 418 | 4 | 7 | 2 | 4 | 1 | 7 | 1 | 42 | |
| D2588 | H (Belgium) | 31 | 7.8e.6.5.4.8.6.2.5.2.5 | 2 | 4 | 7 | 51 | 4 | 1 | 7 | 1 | 40 | |
| ST-460 | D0113 | H (Japan) | 27 | 5.6.6.5.3.8.7.8.4.2.8 | 460 | 24 | 30 | 2 | 2 | 89 | 59 | 6 | 12 |
| D1420 | C (United States) | 27 | 5.6.6.5.3.8.7.8.4.2.8 | 461 | 24 | 65 | 2 | 2 | 89 | 59 | 6 | 13 | |
| ST-443 | D2587 | H (United States) | 26 | 5.6.6.5.2.8.6.10.4.2.6 | 51 | 7 | 17 | 2 | 15 | 23 | 3 | 12 | 7 |
| D2578 | HB (United States) | 28 | 5.6.6.5.4.8.6.10.4.2.6 | 463 | 24 | 17 | 2 | 15 | 23 | 12 | 12 | 6 | |
| ST-42 | D2585 | H (United States) | 37 | 7.5.5.4.2.8.7.8.4.2.8 | 459 | 1 | 2 | 3 | 3 | 5 | 9 | 3 | 44 |
| D1887 | H (United States) | 38 | 7.5.5.4.4.8.7.8.4.2.8 | 469 | 1 | 2 | 3 | 4 | 5 | 9 | 6 | 43 | |
| ST-21 | D2627 | H (United States) | 11 | 5.5.6.4.2.8.4.10.3.2.5 | 21 | 2 | 1 | 1 | 3 | 2 | 1 | 5 | 28 |
| D0142 | L (United States) | 4 | 5.4.6.4.2.8.4.10.3.2.5 | 50 | 2 | 1 | 12 | 3 | 2 | 1 | 5 | 25 | |
| D0135 | H (Canada) | 4 | 5.4.6.4.2.8.4.10.3.2.5 | 50 | 2 | 1 | 12 | 3 | 2 | 1 | 5 | 25 | |
| D2582 | H (Belgium) | 5 | 5.4.6.4.2.8.4.10.4.2.5 | 50 | 2 | 1 | 12 | 3 | 2 | 1 | 5 | 21 | |
| D0140 | H (Japan) | 10 | 5.5.6.4.7e.8.7.10.4.2.8 | 451 | 2 | 1 | 2 | 3 | 2 | 3 | 5 | 14 | |
| D2586 | H (England) | 12 | 5.5.6.4.2.8.6.10.6.2.5 | 43 | 2 | 1 | 5 | 3 | 4 | 1 | 5 | 26 | |
| D0144 | H (Canada) | 3 | 5.4.6.6.2.8.4.10.3.2.5 | 455 | 2 | 1 | 12 | 3 | 2 | 12 | 5 | 27 | |
| D2584 | HB (United States) | 6 | 5.4.6.4.4.8.4.10.4.2.8 | 454 | 2 | 1 | 1 | 5 | 22 | 1 | 8 | 36 | |
| D2761 | H (United States) | 6 | 5.4.6.4.4.8.4.10.4.2.8 | 454 | 2 | 1 | 1 | 5 | 22 | 1 | 8 | 36 | |
| D0116 | H (Japan) | 4 | 5.4.6.4.2.8.4.10.3.2.5 | 456 | 59 | 1 | 12 | 3 | 92 | 1 | 5 | 23 | |
| ST-353 | D1917 | C (United States) | 22 | 5.6.6.4.4.8.6.9.4.2.3 | 353 | 7 | 17 | 5 | 2 | 10 | 3 | 6 | 5 |
| D0129 | H (Japan) | 23 | 5.6.6.4.4.8.6.9.4.2.5 | 404 | 7 | 17 | 5 | 2 | 2 | 3 | 6 | 2 | |
| D0597d | H (United States) | 23 | 5.6.6.4.4.8.6.9.4.2.5 | 452 | 7 | 17 | 12 | 2 | 10 | 3 | 6 | 3 | |
| D1713 | H (United States) | 25 | 5.6.6.4.6.8.6.9.4.2.8 | 452 | 7 | 17 | 12 | 2 | 10 | 3 | 6 | 3 | |
| D2600 | H (United States) | 9 | 5.4.6.4.4.8.6.10.4.3.6 | 452 | 7 | 17 | 12 | 2 | 10 | 3 | 6 | 16 | |
| D2737 | H (United States) | 19 | 5.6.6.4.4.8.6.10.4.2.5 | 462 | 7 | 17 | 5 | 2 | 11 | 3 | 6 | 1 | |
| D0983d | C (United States) | 34 | 7.4.6.4.6.8.6.10.6.2.8 | 457 | 7 | 4 | 5 | 2 | 13 | 3 | 26 | 22 | |
| ST-22 | D0109 | H (Japan) | 36 | 7.5.4.2.2.8.7.8.1.2.8 | 22 | 1 | 3 | 6 | 4 | 3 | 3 | 3 | 45 |
| D2580 | HB (United States) | 35 | 7.5.4.2.1.8.7.8.1.2.8 | 504 | 1 | 3 | 6 | 4 | 11 | 3 | 3 | 46 | |
| D0143 | H (Japan) | 18 | 5.6.6.4.2.8.4.10.4.2.5 | 458 | 8 | 1 | 12 | 4 | 3 | 3 | 3 | 24 | |
| ST-403 | D0133 | BFf | 1 | 4.3.8.6e.4.8.6.10.1.2.8 | 403 | 10 | 27 | 16 | 19 | 10 | 5 | 7 | 48 |
| ST-206 | D2817 | H (United States) | 8 | 5.4.6.4.4.8.6.10.4.2.8 | 122 | 6 | 4 | 5 | 2 | 2 | 1 | 5 | 33 |
| ST-49 | D2581 | HB (United States) | 29 | 5.6.6.5.4.8.7.8.2.2.8 | 467 | 3 | 1 | 5 | 84 | 11 | 11 | 6 | 8 |
| ST-52 | D0114 | H (Japan) | 40 | 9.6.6.4.4.8.6.8.4.2.5 | 305 | 9 | 53 | 2 | 10 | 11 | 3 | 3 | 20 |
| NAg | D0139 | H (Japan) | 20 | 5.6.6.4.4.8.6.10.4.2.6 | 464 | 24 | 2 | 2 | 2 | 10 | 3 | 1 | 9 |
| NA | D2683 | H (United States) | 21 | 5.6.6.4.4.8.6.11.4.2.8 | 503 | 9 | 17 | 2 | 2 | 2 | 1 | 5 | 10/PICK> |
| NA | D0117 | H (United States) | 30 | 6.7.7.4.4.8.3.6.2.2.5 | 468 | 10 | 2 | 50 | 62 | 91 | 73 | 45 | 41 |
| NA | D2579 | C (United States) | 39 | 9.6.5.4.3.8.5.10.7e.2.5 | 40 | 9 | 2 | 5 | 15 | 89 | 3 | 1 | 47 |
| NA | D0127 | U (Canada) | 17 | 5.6.4.4.1.8.6.10.4.2.8 | 301 | 9 | 17 | 5 | 10 | 2 | 1 | 3 | 11 |
a
H, human; L, lamb; HB, human blood; C, chicken; GH, game hen; BF, bovine feces; U, unknown; G, goat.
b
The MEE-targeted loci for which allele numbers are presented are MDH, ME, IDH, THD, CAT, ADK, ALD, PLP, PPP, FUM, and ACO, respectively.
c
Bold-face type indicates alleles different from the reference genotype.
d
Hippuricase-negative isolates.
e
Null alleles.
f
ATCC 33560.
g
NA, not applicable.