TABLE 1.
Strain, plasmid, or primer | Description | Source or referencea | Susceptibility to VGJ-Knφb |
---|---|---|---|
E. coli JM109 | recA1 supE44 endA1 hsdR17 gyrA96 relA1 thiΔ(lac proAB) | Promega | NA |
V. cholerae strains | |||
569B | O1, Classical, Inaba | Calcutta, India, 1945 | 1.6 × 108 |
O395 | O1, Classical, Ogawa | Calcutta, India, 1964 | 8.0 × 107 |
CA401 | O1, Classical, Inaba | Calcutta, India, 1953 | 9.8 × 107 |
1395 | O1, Classical, Inaba | CIEI | 7.6 × 107 |
CA385 | O1, Classical, Ogawa | Calcutta, India, 1953 | 1.8 × 103 |
NIH35A3 | O1, Classical, Inaba | India, 1941 | 4.8 × 104 |
N16961 | O1, El Tor, Inaba | Bangladesh, 1975 | 7.7 × 106 |
C7258 | O1, El Tor, Ogawa | Peru, 1991 | 1.9 × 107 |
638 | C7258 A(CTXφ prophage), hap::celA | 3 | NDc |
C6706 | O1, El Tor, Inaba | Peru, 1991 | 1.3 × 108 |
KHT46 | C6706 Δmsh41 | 54 | ND |
KHT52 | C6706 ΔtcpA10 | 54 | 2.1 × 108 |
1333 | C6706 Δ(CTXφ prophage), hap::celA | CNIC | 3.8 × 107 |
Peru-15 | C6709 Δ(CTXφ/RSI prophages), recA::ctxB | 32 | 5.4 × 107 |
E7946 | O1, El Tor, Ogawa | Bahrain, 1978 | 9.2 × 106 |
Gamene | O1, El Tor, Ogawa | Institute Pasteur | 5.0 × 106 |
3083 | O1, El Tor, Ogawa | Viet Nam, 1964 | 2.1 × 106 |
Malawy | O1, El Tor, Inaba | Institute Pasteur | 4.1 × 107 |
Lima | O1, El Tor, Inaba | Lima, Peru, 1991 | 8.3 × 106 |
SG25-1 | O139 | Calcutta, India, 1993 | 2.4 × 103 |
1837 | O139 | Bangladesh, 1993 | 7.6 × 106 |
CRC262 | O139 | Bangladesh, 2000 | 2.4 × 107 |
CRC266 | O139 | Bangladesh, 2000 | 4.7 × 107 |
MO45 | O139 | Madras, India, 1993 | 3.2 × 104 |
MO12C | O139 | Madurai, India, 1993 | 7.2 × 104 |
Plasmids | |||
pUC19 | General purpose vector | 59 | NA |
pJM132 | Plasmid expressing wild-type mshA from C6706 | 17 | NA |
pKOR1 | R6K origin of replication plus a Knr cassette from pUC4K | This study | NA |
Primers | |||
VGJphi1 | 5′-CAAGTCGAGACGAACTAAGC-3′ | This study | NA |
VGJphi2 | 5′-CCAAGTAATACGATAAACGC-3′ | This study | NA |
VGJphi3 | 5′-CGGCATTTTGTGGGCATCAG-3′ | This study | NA |
VGJphi4 | 5′-CGGCCTATGGTAAAAGTTGC-3′ | This study | NA |
VGJphi5 | 5′-TCTCTGGTATCACCGATGCG-3′ | This study | NA |
VGJphi6 | 5′-GCGCTTCCTCCCGTGTCCTC-3′ | This study | NA |
VGJphi7 | 5′-GCTATGGCTAGAATCAAAGGG-3′ | This study | NA |
VGJphi8 | 5′-AAGCTAAAGAGCAAGGCG-3′ | This study | NA |
NJ1 | 5′-GGATGTTTACGATAGC-3′ | This study | NA |
NJ2 | 5′-TAGAACGTGTCATTGCATCG-3′ | This study | NA |
NJ4 | 5′-GCACACAATTGACGTAAGTAC-3′ | This study | NA |
CIEI, Centro de Investigacion de Enfermedades Infecciosas, Cuernavaca, Mexico; CNIC, Centro Nacional de Investigaciones Científicas, Havana, Cuba.
Number of Kanr transductants appearing after infection of ∼108 cells of the receptor strain with 1010 Kanr transducing particles (multiplicity of infection, 100). NA, not applicable.
ND, no Kanr transductants detected.