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. Author manuscript; available in PMC: 2007 Aug 6.
Published in final edited form as: Biochim Biophys Acta. 2007 Feb 27;1767(4):319–326. doi: 10.1016/j.bbabio.2007.02.014

Figure 4. Overlaid view of the calculated structures of short (A) and long (B) linear alkyl side-chain naphthoquinones docked into the yeast cytochrome bc1 complex.

Figure 4

Amino acids in the cytochrome b binding pocket are labeled and their carbon atoms are green, nitrogen atoms are blue and oxygen atoms are red. The hydroxy-naphthoquinones with linear alkyl chains containing 4 carbons (white), 6 carbons (yellow), 8 carbons (cyan), 9 carbons (orange), 10 carbons (magenta) and 11 carbons (blue) are shown.