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. 2007 Jul 15;4:74. doi: 10.1186/1743-422X-4-74

Table 1.

Primer Sequence a(position, specificity, and polarity)
First PCR
P1 5'-TCA CCA TAT TCT TGG GAA CAA GA-3'
(nt 2823–2845, universal, sense)
S1-2 5'-CGA ACC ACT GAA CAA ATG GC-3'
(nt 685–704, universal, antisense)
Second PCR
Mix A
B2 5'-GGC TCM AGT TCM GGA ACA GT-3'
(nt 67–86, types A to E specific, sense)
BA1R 5'-CTC GCG GAG ATT GAC GAG ATG T-3'
(nt 113–134, type A specific, antisense)
BB1R 5'-CAG GTT GGT GAG TGA CTG GAG A-3'
(nt 324–345, type B specific, antisense)
BC1R 5'-GGT CCT AGG AAT CCT GAT GTT G-3'
(nt 165–186, type C specific, antisense)
Mix B
BD1 5'-GCC AAC AAG GTA GGA GCT-3'
(nt 2979–2996, type D specific, sense)
BE1 5'-CAC CAG AAA TCC AGA TTG GGA CCA-3'
(nt 2955–2978, type E specific, sense)
BF1 5'-GYT ACG GTC CAG GGT TAC CA-3'
(nt 3032–3051, type F specific, sense)
B2R 5'-GGA GGC GGA TYT GCT GGC AA-3'
(nt 3078–3097, types D to F specific, antisense)

a An "M" represents a nucleotide that could be either an A or a C; a "Y" represents a nucleotide that could be either a C or a T. nt: nucleotide.