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. 2003 Sep;69(9):5306–5318. doi: 10.1128/AEM.69.9.5306-5318.2003

TABLE 2.

PCR assays and primers used

PCR assay PCR primer Primer sequence, 5′→3′ Tm (°C) PCR product (nt) Reference
ERIC ERIC-1 ATG TAA GCT CCT GGG GAT TCA C 60.3 Random 18
ERIC-2 AAG TAA GTG ACT GGG GTG AGC G 62.1
RpoB RpoB-F AAC CAG TTC CGC GTT GGC CTG G 65.8 1,088 29
RpoB-R CCT GAA CAA CAC GCT CGG A 58.8
Hsp60 Hsp60-F GGT AGA AGA AGG CGT GGT TGC 61.8 341
Hsp60-R ATG CAT TCG GTG GTG ATC ATC AG 60.6
HemB HemB-F GGC AGA CCA TGA CAG ACT TAA T 64 570
HemB-R ACC TGC AGC AGC TGC AAC CA 60
HemBu HemBu-F ACT TCT CAC GGT CAC TGC GGT 61.8 459
HemBu-R CAT SGC ATA CTC ACC GCT CAC 61.8
HemB_all HemB_all-F CG RCG GTT VAG CGG GTT CAT CTG 66.3 237
HemB_all-R TGA AYC TBG GCA AGC AGG CBG T 63.7
AmpC AmpC-F TCT CTT GCT CTG CTC GCC 61.4 647
AmpC-R ACC GCT TTA CCG TCA CGA TAG 59.8
AmpCu AmpCu-F AAA TCC CTT TGC TGT GCC CTG 59.8 657
AmpCu-R CCA GGC GTA ATG CGC CTC TTC 63.7