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. 2007 Aug;144(4):1797–1812. doi: 10.1104/pp.107.101600

Table I.

Candidate genes preferentially expressed in rice stigma

The total number of the preferentially expressed genes is 548 (665 probe sets). Expressed protein, hypothetical protein, and no hit genes are 103, 23, and 12, respectively. The table lists 149 (173 probe sets) of them with putative annotated functions, and their ratios of stigma/ovary are more than 10 (P < 0.05). ID, Identification.

Probe Set IDa Gene ID Description Stigma-Sb Ovary-Sc Ratiod P Value
Transcription
    Os.3386.1.S1_x_at LOC_Os06g10350 Anthocyanin regulatory C1 protein 2,087.6 90.4 23.1 1.93E-04
    Os.2233.1.S1_at LOC_Os04g47080 Anthocyanin regulatory Lc protein 7,912.47 75.93 104.2 1.98E-04
    Os.38982.1.S1_at LOC_Os02g43820 AP2 domain-containing protein 1,498.93 72.97 20.5 1.67E-02
    Os.49746.1.S1_at LOC_Os01g74020 ARR1 protein like 13,525.53 908.27 14.9 3.05E-04
    Os.31989.1.S1_at LOC_Os03g02900 B3 DNA-binding domain-containing protein 3,014.57 260.47 11.6 2.72E-03
    OsAffx.27272.1.S1_at LOC_Os05g41070 bZIP transcription factor 267.53 23.2 11.5 4.17E-02
    Os.46006.1.S1_at LOC_Os07g47140 CCT motif family protein 10,524.93 313.83 33.5 8.37E-04
    Os.37618.1.S1_at LOC_Os06g04850 Homeobox-Leu zipper protein ATHB-4 1,608.2 93.23 17.2 2.78E-03
    Os.2365.1.S1_at LOC_Os06g04870 Homeobox-Leu zipper protein HAT1 9,315.13 352.67 26.4 1.31E-04
    Os.49761.1.S1_at LOC_Os03g54170 MADS-box transcription factor 34 3,492.13 276.37 12.6 6.24E-03
    OsAffx.21941.1.S1_s_at LOC_Os01g19970 myb-like transcription factor 1,679.7 165.77 10.1 1.98E-04
    OsAffx.14605.1.S1_at LOC_Os05g09020 OsWRKY67 3,840.1 229.9 16.7 1.96E-03
    OsAffx.14605.1.S1_s_at LOC_Os05g09020 OsWRKY67 3,244.13 225.6 14.4 3.32E-07
    OsAffx.2905.1.S1_at LOC_Os02g38320 Protein-binding protein 1,157.37 63.13 18.3 2.91E-04
    OsAffx.11799.1.S1_at LOC_Os01g69200 Regulatory protein 2,144.53 2.9 739.5 2.25E-03
    Os.56298.1.S1_at LOC_Os03g63810 WRKY transcription factor 14 2,149.4 21.93 98 5.89E-04
    OsAffx.17417.1.S1_x_at LOC_Os09g31140 Zinc finger protein F15B8.140, Arabidopsis 374.63 16.3 23 8.56E-03
    Os.49270.1.S1_at LOC_Os06g40960 Zinc finger protein 5,652.4 172.57 32.8 1.37E-03
Cell wall related
    Os.53291.1.S1_at LOC_Os03g64280 1-Aminocyclopropane-1-carboxylate oxidase 861.17 85.33 10.1 7.57E-04
    Os.27155.1.S1_at LOC_Os06g15170 3-Ketoacyl-CoA synthase 2,845.73 76.87 37 1.19E-02
    Os.2367.1.S1_at LOC_Os03g21820 α-Expansin 10 precursor 11,840.7 658.43 18 5.25E-04
    Os.31669.1.S1_at LOC_Os01g53370 Anthocyanidin 5,3-O-glucosyltransferase 475.63 5.57 85.4 6.27E-03
    Os.31669.1.S1_x_at LOC_Os01g53370 Anthocyanidin 5,3-O-glucosyltransferase 667.57 10.43 64 9.77E-03
    Os.8842.1.S1_at LOC_Os07g32620 Anthocyanidin 5,3-O-glucosyltransferase 15,546.97 288.1 54 2.47E-04
    Os.57078.1.S1_at LOC_Os05g45200 Anthocyanidin 5,3-O-glucosyltransferase 1,105.83 47.2 23.4 1.24E-02
    OsAffx.23995.2.S1_x_at LOC_Os01g71094 Basic 7S globulin 2 precursor 349.03 4.27 81.8 3.36E-02
    Os.27968.1.S1_x_at LOC_Os01g71094 Basic 7S globulin 2 precursor 2,661.17 184.47 14.4 1.16E-03
    Os.27968.1.S1_at LOC_Os01g71094 Basic 7S globulin 2 precursor 3,755.6 271.67 13.8 5.83E-03
    Os.2075.1.S1_at LOC_Os01g19220 β-d-Xylosidase 6,110.4 567.4 10.8 1.70E-04
    Os.14358.4.S1_x_at LOC_Os02g12730 β-Galactosidase precursor 6,569.7 243.7 27 7.94E-04
    Os.14358.1.S1_at LOC_Os02g12730 β-Galactosidase precursor 1,490.43 71.67 20.8 3.07E-04
    Os.2322.1.S1_at LOC_Os10g33250 CER1 28,284.37 469.33 60.3 4.07E-03
    Os.2322.2.S1_at LOC_Os10g33250 CER1 1,049.97 32.73 32.1 2.42E-02
    OsAffx.15853.1.S1_x_at LOC_Os06g39970 CESA11, cellulose synthase 252.67 15 16.8 1.77E-02
    OsAffx.15853.1.S1_at LOC_Os06g39970 CESA11, cellulose synthase 200.13 15.33 13.1 5.18E-03
    OsAffx.22999.1.S1_at LOC_Os07g32710 d-Genomic expressed protein 19,698.87 292.03 67.5 4.54E-03
    OsAffx.4968.1.S1_at LOC_Os06g30090 DNA-binding protein 325.67 2.43 133.8 4.58E-03
    Os.5804.1.S1_at LOC_Os11g40210 DNA-binding protein 1,662.97 129.93 12.8 6.56E-04
    OsAffx.2049.2.S1_x_at LOC_Os01g21310 dTDP-Glc 4-6-dehydratase-like protein 534.87 33.43 16 4.85E-02
    Os.26486.1.S1_at LOC_Os09g25850 gl1 protein 19,971.97 353.67 56.5 2.77E-03
    OsAffx.30743.1.S1_at LOC_Os01g14900 Glycerol-3-P acyltransferase 1 135.2 5.87 23 5.01E-03
    Os.32123.1.S1_at LOC_Os01g02930 Glycosyltransferase 7,300.53 480.7 15.2 1.54E-03
    Os.53164.1.S1_at LOC_Os06g18010 Hydroquinone glucosyltransferase 7,375.97 115 64.1 6.97E-04
    Os.15570.1.S1_at LOC_Os07g32630 Hydroquinone glucosyltransferase 10,598 395.8 26.8 1.99E-04
    OsAffx.31322.1.S1_at LOC_Os11g36240 Pectinesterase precursor 6,228.2 1.53 4,061.9 9.86E-04
    Os.6192.1.S1_at LOC_Os03g02460 Retinol dehydrogenase 12 10,156.47 721.63 14.1 1.60E-06
Stress/defense
    Os.4377.1.S1_at LOC_Os02g46970 4-Coumarate-CoA ligase 2 4,725.17 28.87 163.7 1.03E-03
    Os.46537.1.S1_at LOC_Os10g04429 Alcohol acyl transferase 336.03 6.07 55.4 2.42E-03
    Os.23215.1.S1_at LOC_Os06g24404 Anther-specific Pro-rich protein APG precursor 4,965.7 247.37 20.1 2.43E-03
    Os.22594.2.S1_at LOC_Os01g03390 Bowman-Birk-type bran trypsin inhibitor precursor 206.1 9.63 21.4 1.29E-02
    Os.22594.1.S1_at LOC_Os01g03390 Bowman-Birk-type bran trypsin inhibitor precursor 20,176.87 1,726.13 11.7 4.64E-03
    Os.3121.1.S1_at LOC_Os10g28050 Chitinase 2 11,909.67 287.67 41.4 7.30E-03
    Os.47136.1.A1_x_at LOC_Os01g27360 d-Genomic glutathione S-transferase GSTF1 1,140.33 36.13 31.6 2.45E-02
    Os.14539.1.S1_at LOC_Os07g01600 Disease resistance response protein 206 10,803.27 662.5 16.3 2.94E-03
    Os.12922.1.S1_at LOC_Os09g36700 Extracellular ribonuclease LE precursor 9,753.43 146.17 66.7 1.47E-04
    Os.46551.1.S1_at LOC_Os10g17260 Flavonoid 3-monooxygenase 3,769.07 16.27 231.7 6.04E-03
    Os.25651.1.S1_at LOC_Os01g27360 Glutathione S-transferase GSTF1 2,437.67 59.23 41.2 7.15E-03
    OsAffx.13105.1.S1_at LOC_Os03g29250 ids4-like protein 134.93 9.43 14.3 6.16E-03
    Os.51747.1.S1_at LOC_Os03g29250 ids4-like protein 1,188.83 94.13 12.6 2.91E-03
    OsAffx.14039.1.S1_s_at LOC_Os04g30040 Jacalin-like lectin domain containing protein 348.73 5.33 65.4 7.62E-03
    OsAffx.25096.1.S1_at LOC_Os03g15360 Leucoanthocyanidin reductase 4,015.07 294.57 13.6 9.87E-04
    Os.42490.1.S1_at LOC_Os01g62070 Metal tolerance protein C3 28,270.2 199.37 141.8 4.92E-03
    Os.42490.1.S1_x_at LOC_Os01g62070 Metal tolerance protein C3 27,456.03 206.4 133 3.13E-03
    OsAffx.10363.1.S1_at LOC_Os06g03500 NBS-LRR disease resistance protein 225.27 17.27 13 2.59E-02
    Os.12851.1.S1_at LOC_Os01g14670 Nectarin-1 precursor 6,357.33 141.37 45 6.85E-04
    Os.12761.1.S1_at LOC_Os03g46060 Osmotin-like protein OSML13 precursor 19,564.23 702.03 27.9 2.60E-03
    Os.52536.1.S1_at LOC_Os04g43800 Phenyl-Ala ammonia-lyase 6,313.3 20.2 312.5 2.92E-03
    Os.50455.1.S1_at LOC_Os06g40170 Phospholipase D-α-2 3,267.17 166.77 19.6 9.06E-05
    Os.11575.1.S1_a_at LOC_Os03g46440 Regulatory protein NPR1 1,400.97 120.6 11.6 9.44E-03
    OsAffx.13793.1.S1_at LOC_Os04g12840 Resistance protein 1,537.77 142.13 10.8 4.86E-05
    Os.10600.1.S1_a_at LOC_Os01g25820 Respiratory burst oxidase 2 12,428.1 1,231.33 10.1 2.68E-03
    Os.57186.1.S1_at LOC_Os05g27590 Wound-induced protein WI12-containing protein 1,239.17 45.27 27.4 3.73E-02
Signal transduction
    OsAffx.13408.1.S1_at LOC_Os03g48560 BGGP β-1-3-galactosyl-O-glycosyl-glycoprotein 350.6 24.93 14.1 7.61E-03
    OsAffx.13408.1.S1_x_at LOC_Os03g48560 BGGP β-1-3-galactosyl-O-glycosyl-glycoprotein 224.77 19.97 11.3 1.68E-03
    OsAffx.24314.1.S1_at LOC_Os02g18930 Calcineurin B-like protein 4 2,628.87 24.77 106.1 4.50E-03
    Os.15639.1.S1_at LOC_Os06g40370 CBL-interacting Ser/Thr-protein kinase 24 7,217.23 666.6 10.8 3.66E-03
    Os.48846.1.S1_at LOC_Os09g24840 GAST1 protein precursor 3,067.53 136.57 22.5 1.28E-04
    Os.17201.1.S1_at LOC_Os07g38810 Lectin receptor-type protein kinase 3,123.2 82.57 37.8 3.28E-03
    Os.6360.1.S1_at LOC_Os08g02996 Lectin-like receptor kinase 1 4,453.83 85.53 52.1 1.53E-03
    Os.6360.2.S1_x_at LOC_Os08g02996 Lectin-like receptor kinase 1 4,304.07 162.17 26.5 2.10E-03
    OsAffx.30716.1.S1_x_at LOC_Os10g38960 Lectin-like receptor kinase 7 3,306.8 244.23 13.5 3.84E-03
    Os.12660.1.S2_at LOC_Os07g38800 Lectin-like receptor kinase 7 2,745.87 27.73 99 2.88E-03
    Os.12660.1.S1_at LOC_Os07g38800 Lectin-like receptor kinase 7 938.63 16.2 57.9 1.14E-02
    Os.26943.1.S1_at LOC_Os09g32840 Nucleotide pyrophosphatase/phosphodiesterase 3,333.23 205.1 16.3 1.96E-03
    OsAffx.29386.1.S1_x_at LOC_Os08g27810 OsWAK115 1,312.67 121.3 10.8 1.52E-02
    OsAffx.6309.1.S1_at LOC_Os09g16980 OsWAK86 2,528.73 9.33 270.9 2.87E-03
    Os.54625.1.S1_at LOC_Os12g42020 Protein kinase PVPK-1 7,055.77 441.67 16 2.73E-04
    Os.44814.1.S1_at LOC_Os06g03610 Protein kinase 85.97 4.37 19.7 1.29E-02
    OsAffx.17892.1.S1_at LOC_Os09g25540 Receptor-like protein kinase precursor 124.07 6.3 19.7 3.54E-02
    OsAffx.14892.1.S1_at LOC_Os05g30740 SRC2 823.27 54.3 15.2 6.54E-04
Lipid metabolism
    Os.5295.1.S1_at LOC_Os08g10010 Acyl-desaturase, chloroplast precursor 12,530.77 158.63 79 4.74E-03
    Os.30537.1.S1_at LOC_Os03g01820 C-4 methylsterol oxidase 7,759.1 306.77 25.3 1.48E-04
    Os.57035.1.S1_at LOC_Os01g21300 Catalytic/hydrolase 605.6 45.2 13.4 1.21E-02
    Os.54454.1.S1_at LOC_Os11g32650 Chalcone synthase 765.67 4.03 189.8 1.61E-02
    Os.57449.1.S1_x_at LOC_Os11g32650 Chalcone synthase 10,288 150.9 68.2 3.56E-03
    Os.37295.1.S1_at LOC_Os11g02440 Chalcone-flavonone isomerase 2,854.53 13.1 217.9 7.51E-03
    Os.6354.1.S1_s_at LOC_Os12g02370 Chalcone-flavonone isomerase 13,196.17 228.1 57.9 1.56E-04
    Os.6354.1.S1_at LOC_Os12g02370 Chalcone-flavonone isomerase 5,023.07 118.8 42.3 4.68E-04
    Os.53034.1.A1_at LOC_Os11g18194 Cycloartenol synthase 10,955.6 23.7 462.3 4.83E-03
    Os.52235.1.S1_at LOC_Os02g21810 Cyt P450 2,250.9 4.37 515.5 6.50E-03
    Os.25621.2.S1_at LOC_Os12g16720 Cyt P450 16,932.33 546.27 31 2.06E-03
    Os.53717.1.S1_at LOC_Os06g01250 Cyt P450 13,610.93 88.73 153.4 2.18E-04
    Os.39637.1.A1_s_at LOC_Os09g17000 Glycerophosphoryl diester phosphodiesterase family protein 6,529.73 75.93 86 3.88E-03
    Os.39637.1.A1_at LOC_Os09g17000 Glycerophosphoryl diester phosphodiesterase family protein 4,584.1 73.8 62.1 2.93E-03
    Os.47906.1.A1_at LOC_Os06g49770 Lipid-binding protein 7,864.5 210.5 37.4 3.39E-03
    OsAffx.32067.1.S1_x_at LOC_Os12g37320 Lipoxygenase 2.2, chloroplast precursor 194.63 7.5 26 4.50E-03
    Os.41251.1.A1_at LOC_Os01g43140 Triacylglycerol lipase 2,613.6 244.57 10.7 3.00E-04
    OsAffx.14502.1.S1_at LOC_Os05g02350 Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 393.47 12.6 31.2 1.50E-03
    Os.29290.1.S1_at LOC_Os01g08780 Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2 4,496.2 65.27 68.9 3.62E-03
Transport
    Os.17440.1.S1_at LOC_Os04g44610 ABC transporter C05D10.3 in chromosome III 9,093.1 674.9 13.5 5.79E-04
    Os.55221.1.S1_at LOC_Os08g43120 ABC transporter 11,133.57 462.03 24.1 1.16E-02
    OsAffx.3427.1.S1_at LOC_Os03g37960 Acyl-CoA-binding protein 782.93 58.17 13.5 4.37E-03
    Os.26802.2.S1_at LOC_Os12g08090 Amino acid transporter 18,660.77 1,722.8 10.8 4.13E-04
    OsAffx.19991.1.S1_at LOC_Os12g36660 Antiporter/drug transporter/transporter 1,091.07 41.33 26.4 5.61E-03
    OsAffx.24678.3.S1_at LOC_Os02g41860 Aquaporin PIP2.2 1,547.47 138.83 11.1 2.14E-03
    OsAffx.24678.2.S1_at LOC_Os02g41860 Aquaporin PIP2.2 790.03 73.83 10.7 8.10E-03
    Os.49307.1.S1_at LOC_Os12g22284 ABC subfamily G member 2 3,085.93 7.1 434.6 6.65E-04
    Os.52570.1.S1_at LOC_Os12g44110 ligA 12,413.13 851.5 14.6 1.50E-02
    OsAffx.3105.1.S1_at LOC_Os02g58530 Major facilitator superfamily protein 237.23 11.8 20.1 2.45E-02
    Os.27833.1.S1_at LOC_Os12g32940 Major myo-inositol transporter iolT 2,600.73 98.1 26.5 5.41E-03
    OsAffx.20797.1.S1_at LOC_Os10g02340 Peptide transporter PTR2 275 12.63 21.8 4.68E-03
    Os.46447.1.S1_at LOC_Os10g33210 Peptide transporter PTR2 1,797.1 113.97 15.8 5.30E-03
    Os.11547.1.S1_s_at LOC_Os06g48030 Peroxidase 16 precursor 9,654.5 622.3 15.5 5.94E-05
    Os.5843.1.S1_at LOC_Os06g46799 Peroxidase 39 precursor 11,243.27 277.83 40.5 3.39E-03
    Os.53303.1.S1_at LOC_Os06g46799 Peroxidase 39 precursor 1,034.43 56.8 18.2 5.73E-03
    Os.10754.1.S1_at LOC_Os03g06520 Sulfate transporter 3.1 7,211.23 668.47 10.8 3.14E-03
Hormone related
    Os.27822.2.S1_at LOC_Os04g47520 Auxin-independent growth promoter 1,048.63 101.87 10.3 2.04E-02
    OsAffx.21458.1.S1_at LOC_Os01g46030 Brassinosteroid insensitive 1-associated receptor kinase 1 precursor 278.63 17.87 15.6 6.22E-03
    OsAffx.28262.1.S1_at LOC_Os07g04520 Brassinosteroid insensitive 1-associated receptor kinase 1 precursor 939.93 8.37 112.3 1.19E-02
    OsAffx.15447.1.S1_at LOC_Os06g16000 Cytokinin-O-glucosyltransferase 3 2,037.37 186.13 10.9 6.74E-04
    Os.36449.1.S1_at LOC_Os01g57610 IAA-amido synthetase GH3.1 10,154.47 533.07 19 4.14E-04
    OsAffx.32069.1.S1_at LOC_Os12g37490 N-Acetyltransferase 405.6 22.13 18.3 8.10E-04
    Os.55720.1.S1_at LOC_Os04g56690 OsSAUR23 997.73 47.67 20.9 3.74E-03
    OsAffx.30169.1.S1_at LOC_Os09g37430 OsSAUR48 781.37 51.53 15.2 1.61E-03
    Os.51408.1.S1_at LOC_Os09g37490 OsSAUR54 1,076.63 64.17 16.8 1.47E-02
    Os.50785.1.S1_at LOC_Os09g37500 OsSAUR55 5,390.27 317.77 17 4.96E-03
Protein metabolism
    Os.54875.1.S1_at LOC_Os05g04584 3-N-debenzoyl-2-deoxytaxol N-benzoyltransferase 337.53 19.3 17.5 8.62E-04
    OsAffx.24010.1.S1_x_at LOC_Os01g72020 BOP2 806.33 30.57 26.4 2.00E-03
    Os.49276.1.S1_at LOC_Os01g72020 BOP2 1,908.9 162.2 11.8 1.03E-03
    Os.52793.1.S1_at LOC_Os04g43840 Carboxy-lyase 5,289.97 30.97 170.8 2.02E-03
    Os.10714.1.S1_s_at LOC_Os04g38450 γ-Glutamyltranspeptidase 1 precursor 1,0921.73 330.83 33 6.63E-04
    Os.10728.1.S1_at LOC_Os02g46260 Ser carboxypeptidase 1 precursor 23,058.93 857.67 26.9 3.13E-03
    OsAffx.10889.1.S1_x_at LOC_Os01g03170 Seven in absentia protein family protein 4,477.57 409.87 10.9 2.57E-04
    Os.3768.1.S1_at LOC_Os02g44590 Subtilisin-like protease precursor 11,949.97 366.4 32.6 5.07E-03
    Os.8271.2.S1_x_at LOC_Os01g67500 Ubiquitin-protein ligase 1,791.4 174.73 10.3 8.17E-03
    OsAffx.13747.1.S1_at LOC_Os04g10360 Xylem Ser proteinase 1 precursor 4,292.53 12.23 350.9 6.60E-04
Carbohydrate and energy metabolism
    Os.53178.2.S1_at LOC_Os05g47840 ATIPT1 124.5 10.23 12.2 9.57E-03
    OsAffx.28287.1.S1_at LOC_Os07g05380 ATPase 1,148.87 33.53 34.3 6.85E-03
    OsAffx.5436.1.S1_at LOC_Os07g25540 Disulfide oxidoreductase/monooxygenase/oxidoreductase 197.67 8.37 23.6 1.74E-03
    OsAffx.31989.1.S1_at LOC_Os12g32750 Disulfide oxidoreductase/monooxygenase/oxidoreductase 2,854.47 149.03 19.2 6.31E-04
    Os.18223.1.S1_s_at LOC_Os12g32750 Disulfide oxidoreductase/monooxygenase/oxidoreductase 7,562.97 747.77 10.1 3.81E-04
    OsAffx.13016.1.S1_at LOC_Os03g25150 Flavonoid 3,5-hydroxylase 2 1,361.83 57.23 23.8 4.06E-02
    OsAffx.13016.1.S1_x_at LOC_Os03g25150 Flavonoid 3,5-hydroxylase 2 1,470.4 78.63 18.7 4.62E-02
    OsAffx.27142.1.S1_at LOC_Os05g33644 Hydrolase 1,714.27 93.2 18.4 2.38E-02
    Os.46268.1.S1_at LOC_Os10g02390 NAD(P)H-dependent oxidoreductase 7,951.73 3.63 2,188.6 6.30E-03
Nucleic acid metabolism
    Os.855.1.S1_at LOC_Os01g03730 Nuclease PA3 5,603.9 85.67 65.4 1.12E-02
    Os.55424.2.S1_at LOC_Os02g50740 Nucleotide binding protein 2,223.23 164.1 13.5 8.77E-05
Amino acid metabolism
    Os.27876.1.S1_x_at LOC_Os08g04540 Aromatic-l-amino acid decarboxylase 3,587.43 19.3 185.9 1.49E-02
    OsAffx.5702.1.S1_s_at LOC_Os08g04560 Aromatic-l-amino acid decarboxylase 23,981.57 192.23 124.8 9.93E-04
Unclassified
    Os.48933.1.S1_at LOC_Os05g37880 axi 1-like protein 12,167.7 1,092.03 11.1 1.32E-03
    OsAffx.3289.1.S1_at LOC_Os03g21450 Bromodomain-containing protein 433.77 23.43 18.5 2.21E-02
    Os.28450.1.S1_at LOC_Os01g70730 FLP1 3,929.67 103.73 37.9 1.54E-04
    Os.6003.1.S1_x_at LOC_Os09g26310 Hypro1 3,628.77 109.37 33.2 4.80E-05
    Os.51638.1.S1_s_at LOC_Os09g26310 Hypro1 4,551.53 161 28.3 4.31E-04
    Os.49681.1.S1_at LOC_Os03g07140 Male sterility protein 2 2,714.93 42.37 64.1 4.57E-02
    Os.24786.1.S1_s_at LOC_Os04g48870 Nitrilase-associated protein 4,117.03 126.8 32.5 2.12E-02
    OsAffx.26533.1.S1_at LOC_Os04g48870 Nitrilase-associated protein 4,745.7 152.2 31.2 1.16E-02
    OsAffx.12915.1.S1_at LOC_Os03g18300 Pherophorin-like protein 570.47 21.47 26.6 1.84E-03
    Os.46488.1.S1_at LOC_Os10g05790 Pro-rich protein 28,988.2 512.93 56.5 1.96E-03
    OsAffx.16391.1.S1_at LOC_Os07g24100 Retrotransposon protein 707.07 5.73 123.3 1.28E-04
    Os.28346.5.S1_x_at LOC_Os03g63124 Retrotransposon protein, unclassified 242 23.33 10.4 1.57E-02
    Os.50793.1.S1_at LOC_Os12g01900 Retrotransposon protein, unclassified 621.7 6.53 95.2 7.10E-03
    Os.55132.1.S1_at LOC_Os03g26990 VQ motif family protein 222.07 20.03 11.1 1.21E-02
a

The gene probes of 57 K Affymetrix rice GeneChip. ID, Identity.

b

The gene's average signal intensity in stigma derived from three biological replicates of 57 K Affymetrix rice GeneChip. Stigma-S, Stigma signal.

c

The gene's average signal intensity in ovary derived from three biological replicates of 57 K Affymetrix rice GeneChip. Ovary-S, Ovary signal.

d

The ratios of stigma/ovary.