Table 3. Likelihood Ratio Test (LRT) of Homogeneity* of the association across MVL categories.
SNP | LRT | p value |
CCR2-64V→I | 0.38 | 0.54 |
CCR5-2733A→G | 0.71 | 0.40 |
CCR5-2554G→T | 0.049 | 0.83 |
CCR5-2459A→G | 3.83 | 0.05 |
CCR5-2135C→T | 3.60 | 0.05 |
CCR5-2132C→T | 0.001 | 0.97 |
CCR5-2086A→G | 2.02 | 0.15 |
CCR5-1835C→T | 0.53 | 0.47 |
The LRT is the likelihood ratio Chi-Square with 1 degree of freedom, calculated as the deviance of the full model minus the deviance of the reduced model, where the models differed by inclusion of the interaction term.