Table 1.
Tag counts for endoderm and ectoderm genes in the endoderm and ectoderm SAGE libraries.
| gene symbol | tag sequence | Early Endoderm (108579) | Foregut (102972) | Hindgut (110529) | Neural tube (97364) | Anterior neuropore (103594) | Posterior neuropore (102196) |
| endoderm genes | |||||||
| Cxcr4 | TGAATGAGTGTCTAGGC | 5 | 1 | 6 | 2 | 2 | 2 |
| Ecad | TAATGTTGCTAGAGTGA | 9 | 9 | 8 | 0 | 0 | 1 |
| Foxa1 | TTAACGACAAAAAAAAA | 5 | 4 | 1 | 0 | 1 | 0 |
| Foxa2 | GTGAAATCCAGGTCTCG | 8 | 6 | 9 | 1 | 2 | 0 |
| Foxa3 | CTGCTATGCACCAAGAT | 2 | 1 | 3 | 0 | 0 | 0 |
| Gata4 | CCTGCCCCTCCTCCACA | 1 | 2 | 1 | 0 | 0 | 0 |
| Gata6 | TACACAATAATTTTTTT | 3 | 6 | 3 | 0 | 0 | 0 |
| Hhex | TATATAGCATTACTTCT | 2 | 4 | 1 | 0 | 0 | 0 |
| Ihh | GGAGAATTTTGGGAATG | 2 | 0 | 4 | 0 | 0 | 0 |
| Shh | TTCTTGGAAACCAAGAC | 11 | 10 | 7 | 1 | 0 | 0 |
| Sox17 | CGTGTTTTCTCAATCTT | 21 | 2 | 8 | 0 | 0 | 0 |
| ectoderm genes | |||||||
| Fgf15 | ACTTGTTTTCTACATTA | 0 | 0 | 0 | 1 | 4 | 2 |
| Hes5 | TGGGAGAACACAGGCTG | 0 | 0 | 0 | 1 | 3 | 2 |
| Ncad | TTAATATCTTTCGTTAT | 0 | 0 | 1 | 3 | 2 | 3 |
| Pax6 | GATTTAAGAGTTTTATC | 0 | 0 | 0 | 4 | 1 | 1 |
| Sox2 | TATATATTTGAACTAAT | 1 | 3 | 1 | 6 | 5 | 10 |
| Sox3 | TACCTGCCACCTGGCGG | 0 | 0 | 0 | 3 | 4 | 3 |
| Zic2 | TGATGTTTCAGTGCTTT | 0 | 0 | 0 | 6 | 4 | 4 |
| Zic3 | AATAACAGAAAAGTGGA | 0 | 0 | 0 | 1 | 1 | 0 |
The total number of tags in each library is bracketed in the column heading.