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. 2007 Jun 22;73(16):5354–5362. doi: 10.1128/AEM.00472-07

TABLE 2.

Primer sequences

Primer Sequence (5′→3′) Target fragment Restriction site
hag-F GGGATCAAGTGAAGCTTGGAATTGACG hag HindIII
hag-R CGGAATTCCATTTCCTCTCCTCCTTGAATATGTTGTTAAGGCACGTCC hag EcoRI
QE60-cssR-F CATGCCATGGCATACACCATTTATCTAGTTGAAGA cssR NcoI
QE60-cssR-R CGGGATCCTGATGACATCATCCTGTAGCCGAAACCGTA cssR BamHI
QE30-cssR-F CGGGATCCTTGTCATACACCATTTATCTAGTTGAAG cssR BamHI
QE30-cssR-R CCGAGCTCTTATCATGATGACATCATCCTGTAGCCGAAA cssR SacI
htrA-EMSA-F AACGGATCAGCCGATACGTT PhtrA None
htrA-EMSA-R TCATCACGATAGTTATCCAT PhtrA None
htrB-EMSA-F CGTCAGCAGTTCATTCAG PhtrB None
htrB-EMSA-R CCATCACGTCGATAATCC PhtrB None
citM-EMSA-F AGGTCACCTCCTCACCTGAA PcitM None
citM-EMSA-R CATGAGAAAGCCTAAGATTGCTAAC PcitM None
flgB-EMSA-F TGTATCGTTCCAGAAAATAAGC PflgB None
flgB-EMSA-R TCAGGGCGAGAAATGTAGTTC PflgB None
ykoJ-EMSA-F TGCCGATCAAATCAGCAG PykoJ None
ykoJ-EMSA-R TTGTGAGCCCCTCCTTTGT PykoJ None
yloA-EMSA-F CCAGAAGCACAAGCACCATA PyloA None
yloA-EMSA-R GTATGTAAACATGCCATCAAACG PyloA None
pK-F AATCTATCGACATATCCTGCAA PcomK None
K-FP-R GGAATTCTTGCGCCGTTCACTTCATAC PcomK None