TABLE 4.
Pairwise comparisons of fixed differences between isolates at the TPI and beta giardin loci
| Locus | Isolate | No. of fixed differencesa
|
||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| WB | Gen | CAT | Be-2 | AB | N | GS | CM | Be-1 | ||
| TPI | WB | 0 | 0 | 0 | 1 | 3 | 124 | 127 | 0 | |
| Gen | 0 | 0 | 1 | 3 | 124 | 127 | 0 | |||
| CAT | 0 | 1 | 3 | 124 | 127 | 0 | ||||
| Be-2 | 1 | 3 | 124 | 127 | 0 | |||||
| AB | 0 | 122 | 125 | 0 | ||||||
| N | 123 | 126 | 1 | |||||||
| GS | 0 | 0 | ||||||||
| CM | 0 | |||||||||
| Be-1 | ||||||||||
| Beta giardin | WB | 1 | 0 | 0 | 4 | 2 | 44 | 0 | 5 | |
| Gen | 1 | 1 | 5 | 3 | 45 | 1 | 6 | |||
| CAT | 0 | 4 | 2 | 44 | 0 | 5 | ||||
| Be-2 | 4 | 2 | 44 | 0 | 5 | |||||
| AB | 2 | 44 | 2 | 6 | ||||||
| N | 44 | 1 | 5 | |||||||
| GS | 1 | 1 | ||||||||
| CM | 0 | |||||||||
| Be-1 | ||||||||||
a
Each value represents the number of SNPs fixed in the population of one isolate but not the other.