TABLE 4.
Multiplex PCR results from 23 S. enterica serovar Typhimurium isolates selected for microarray analysis
| PFGE profile | Isolate | Phage type | Ability of oligonucleotide pair to detect:
|
||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Prophage 1/ST104
|
Prophage 2
|
Prophage 3
|
Prophage 4
|
Prophage 5
|
SGI1
|
||||||||||
| P1 | P2 | P3 | P4 | P5 | P6 | P7 | P8 | P9 | P10 | P11 | P12 | P13 | |||
| 1 | AWF002008 | DT104 | + | + | + | + | + | + | + | + | + | + | + | + | + |
| 1 | AWX002821 | DT104 | + | + | + | + | + | + | + | + | + | + | + | + | + |
| 1 | H20002800 | DT104 | + | + | + | + | + | + | + | + | + | + | + | + | + |
| 1 | H20021651 | DT104b | + | + | + | + | + | + | + | + | + | + | + | + | + |
| 1 | AWX000826 | DT104b | + | + | + | + | + | + | + | + | + | + | + | + | + |
| 1 | AWX000841 | Nontypeable | + | + | + | + | + | + | + | + | + | + | + | + | + |
| 1 | H20021958 | Nontypeable | + | + | + | + | + | + | + | + | + | + | + | + | + |
| 2 | H20004019 | DT170 | − | − | + | + | − | − | + | + | + | − | − | − | + |
| 2 | AWF009147 | DT170 | − | − | + | + | − | − | + | + | + | − | − | − | + |
| 2 | H20021856 | DT170 | − | − | + | + | − | − | + | + | + | − | − | − | + |
| 2 | AWX003658 | DT168a | − | − | + | + | − | − | + | + | + | − | − | − | + |
| 2 | AWX004816 | Nontypeable | − | − | + | + | − | − | + | + | + | − | − | − | + |
| 3 | AWF007581 | Nontypeable | − | − | + | + | − | − | + | + | + | − | − | − | + |
| 3 | H19963477 | DT170 | − | − | + | + | − | − | + | + | + | − | − | − | + |
| 3 | H19992292 | DT170 | − | − | + | + | − | − | + | + | + | − | − | − | + |
| 4 | AWX004814 | DT193 | − | − | + | + | − | − | + | + | + | − | − | − | + |
| 5 | H20004467 | Nontypeable | + | + | + | + | − | − | + | − | + | − | − | − | + |
| 6 | H20023824 | DT170 | − | − | + | + | − | − | + | + | + | − | − | − | + |
| 7 | AWX006747 | RDNC | − | − | + | + | − | − | + | − | + | + | − | − | + |
| 7 | AWX006748 | RDNC | − | − | + | + | − | − | + | faint | + | + | − | − | + |
| 8 | H20003919 | RDNC | − | − | + | + | − | − | + | − | + | + | − | − | + |
| 9 | H20023530 | DT193 | − | − | + | + | − | − | + | faint | + | − | − | − | + |
| 10 | AWF009126 | DT170 | − | − | + | + | − | − | + | + | + | − | − | − | + |