TABLE 3.
Allelic profiles of isolates belonging to the 92 STs identified in this study
| Strain | Serotype | ST | Allelic assignment (arbitrary allele no.)
|
|||||||
|---|---|---|---|---|---|---|---|---|---|---|
| tkt | glnA | gltA | glk | aroE | murI | lepC | gyrA | |||
| UA159 | c | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| MT8148 | c | 63 | 4 | 1 | 1 | 3 | 2 | 3 | 1 | 1 |
| MT4065 | c | 64 | 4 | 1 | 1 | 3 | 2 | 3 | 1 | 14 |
| MT4071 | c | 92 | 14 | 2 | 4 | 1 | 2 | 3 | 1 | 1 |
| MT4076 | c | 2 | 1 | 1 | 1 | 13 | 1 | 1 | 1 | 1 |
| MT4078 | c | 20 | 1 | 5 | 9 | 1 | 4 | 3 | 11 | 9 |
| MT4083 | c | 26 | 1 | 9 | 1 | 1 | 2 | 5 | 3 | 10 |
| MT4087 | c | 29 | 1 | 15 | 15 | 3 | 4 | 2 | 19 | 1 |
| MT4093 | c | 24 | 1 | 8 | 9 | 1 | 4 | 2 | 20 | 1 |
| MT4112 | c | 61 | 3 | 14 | 1 | 17 | 20 | 15 | 21 | 1 |
| MT4118 | c | 65 | 4 | 1 | 1 | 18 | 2 | 3 | 1 | 1 |
| MT4164 | c | 23 | 1 | 8 | 9 | 1 | 4 | 2 | 11 | 9 |
| MT4117 | e | 81 | 6 | 2 | 7 | 3 | 2 | 7 | 1 | 1 |
| MT4119 | e | 59 | 3 | 10 | 15 | 3 | 21 | 2 | 1 | 1 |
| MT4217 | e | 6 | 1 | 1 | 1 | 19 | 2 | 4 | 7 | 3 |
| MT4245 | e | 72 | 6 | 1 | 1 | 3 | 2 | 4 | 1 | 3 |
| MT4274 | e | 30 | 1 | 16 | 23 | 6 | 2 | 4 | 22 | 15 |
| MT4278 | e | 84 | 6 | 5 | 15 | 3 | 2 | 4 | 1 | 3 |
| MT4279 | e | 83 | 6 | 5 | 9 | 3 | 2 | 4 | 1 | 3 |
| MT4293 | e | 73 | 6 | 1 | 1 | 3 | 14 | 4 | 1 | 16 |
| MT4368 | e | 10 | 1 | 2 | 7 | 3 | 2 | 7 | 1 | 1 |
| MT4369 | e | 11 | 1 | 2 | 7 | 3 | 2 | 7 | 1 | 17 |
| MT4251 | f | 85 | 7 | 2 | 11 | 3 | 2 | 4 | 1 | 3 |
| MT4333 | f | 46 | 3 | 2 | 5 | 1 | 2 | 3 | 23 | 1 |
| MT4348 | f | 15 | 1 | 3 | 8 | 1 | 6 | 10 | 3 | 1 |
| NN2098 | c | 31 | 2 | 1 | 1 | 2 | 2 | 2 | 1 | 2 |
| NN2099 | c | 44 | 3 | 2 | 2 | 3 | 3 | 3 | 2 | 1 |
| NN2092 | c | 9 | 1 | 2 | 1 | 3 | 2 | 4 | 1 | 3 |
| NN2093 | c | 54 | 3 | 3 | 3 | 1 | 4 | 3 | 3 | 1 |
| NN2025 | c | 70 | 5 | 4 | 1 | 4 | 5 | 5 | 4 | 4 |
| NN2004 | c | 33 | 2 | 2 | 4 | 5 | 4 | 6 | 1 | 1 |
| NN2085 | c | 39 | 2 | 5 | 5 | 6 | 2 | 3 | 3 | 1 |
| NN2087 | e | 56 | 3 | 6 | 6 | 4 | 2 | 5 | 5 | 4 |
| NN2089 | e | 42 | 3 | 1 | 1 | 1 | 2 | 4 | 1 | 3 |
| NN2037 | e | 10 | 1 | 2 | 7 | 3 | 2 | 7 | 1 | 1 |
| NN2044 | e | 22 | 1 | 7 | 1 | 3 | 2 | 3 | 1 | 4 |
| NN2054 | e | 19 | 1 | 5 | 7 | 3 | 2 | 7 | 1 | 1 |
| NN2076 | e | 75 | 6 | 1 | 1 | 3 | 2 | 8 | 1 | 1 |
| NN2042 | e | 10 | 1 | 2 | 7 | 3 | 2 | 7 | 1 | 1 |
| NN2053 | e | 76 | 6 | 1 | 6 | 4 | 5 | 5 | 1 | 4 |
| NN2072 | f | 69 | 4 | 3 | 8 | 3 | 2 | 5 | 1 | 1 |
| NN2165 | f | 57 | 3 | 8 | 1 | 1 | 6 | 3 | 3 | 1 |
| NN2007 | f | 35 | 2 | 3 | 8 | 1 | 2 | 9 | 1 | 1 |
| NN2117 | f | 48 | 3 | 2 | 9 | 1 | 7 | 4 | 6 | 1 |
| NN2138-2 | f | 45 | 3 | 2 | 5 | 1 | 2 | 3 | 7 | 1 |
| NN2168M-5 | c | 49 | 3 | 2 | 10 | 3 | 8 | 3 | 5 | 1 |
| NN2121 | f | 85 | 7 | 2 | 11 | 3 | 2 | 4 | 1 | 3 |
| NN2431M-2 | f | 86 | 8 | 3 | 8 | 1 | 6 | 10 | 1 | 1 |
| NN2011 | k | 47 | 3 | 2 | 8 | 7 | 10 | 5 | 3 | 1 |
| NN2111 | k | 67 | 4 | 2 | 12 | 1 | 7 | 5 | 8 | 6 |
| NN2323M-1 | k | 66 | 4 | 2 | 12 | 1 | 4 | 5 | 8 | 6 |
| NN2193-1 | k | 16 | 1 | 3 | 13 | 8 | 11 | 2 | 9 | 7 |
| NN2105 | k | 68 | 4 | 2 | 12 | 1 | 4 | 5 | 10 | 6 |
| LJ1 | c | 17 | 1 | 3 | 15 | 1 | 2 | 3 | 12 | 1 |
| LJ2 | e | 40 | 2 | 9 | 5 | 1 | 4 | 3 | 7 | 1 |
| LJ3 | e | 5 | 1 | 1 | 1 | 3 | 2 | 4 | 1 | 3 |
| LJ4 | e | 7 | 1 | 1 | 6 | 4 | 5 | 5 | 1 | 8 |
| LJ7 | f | 14 | 1 | 3 | 8 | 1 | 4 | 10 | 3 | 1 |
| LJ11 | c | 25 | 1 | 8 | 14 | 1 | 4 | 2 | 11 | 9 |
| LJ12 | c | 25 | 1 | 8 | 14 | 1 | 4 | 2 | 11 | 9 |
| LJ13 | c | 58 | 3 | 10 | 15 | 4 | 13 | 11 | 13 | 1 |
| LJ14 | c | 52 | 3 | 2 | 15 | 3 | 1 | 11 | 1 | 3 |
| LJ16 | c | 43 | 3 | 2 | 1 | 3 | 8 | 3 | 5 | 1 |
| LJ17 | c | 63 | 4 | 1 | 1 | 3 | 2 | 3 | 1 | 1 |
| LJ18 | e | 77 | 6 | 1 | 16 | 3 | 2 | 4 | 1 | 3 |
| LJ19 | e | 71 | 6 | 1 | 1 | 1 | 2 | 4 | 1 | 3 |
| LJ20 | c | 27 | 1 | 9 | 1 | 1 | 2 | 12 | 3 | 10 |
| LJ22 | c | 82 | 6 | 4 | 1 | 4 | 5 | 5 | 1 | 4 |
| LJ23 | k | 88 | 10 | 2 | 5 | 7 | 6 | 5 | 11 | 1 |
| LJ24 | f | 34 | 2 | 3 | 8 | 1 | 2 | 5 | 3 | 1 |
| LJ25 | c | 89 | 11 | 11 | 9 | 9 | 3 | 3 | 14 | 1 |
| LJ26 | c | 51 | 3 | 2 | 10 | 10 | 2 | 5 | 3 | 1 |
| LJ27 | c | 90 | 12 | 2 | 1 | 11 | 14 | 13 | 15 | 11 |
| LJ30 | c | 8 | 1 | 1 | 8 | 3 | 1 | 14 | 1 | 1 |
| LJ31 | c | 8 | 1 | 1 | 8 | 3 | 1 | 14 | 1 | 1 |
| LJ32 | f | 37 | 2 | 3 | 17 | 1 | 2 | 5 | 3 | 1 |
| LJ15 | c | 62 | 4 | 1 | 1 | 2 | 15 | 3 | 1 | 1 |
| LJ29 | c | 12 | 1 | 2 | 7 | 3 | 16 | 7 | 1 | 1 |
| LJ34 | e | 3 | 1 | 1 | 1 | 3 | 2 | 3 | 1 | 3 |
| LJ36 | e | 72 | 6 | 1 | 1 | 3 | 2 | 4 | 1 | 3 |
| LJ50 | e | 78 | 6 | 1 | 19 | 4 | 5 | 5 | 1 | 4 |
| LJ59 | e | 72 | 6 | 1 | 1 | 3 | 2 | 4 | 1 | 3 |
| LJ64 | e | 74 | 6 | 1 | 1 | 3 | 2 | 4 | 4 | 3 |
| SA22 | f | 21 | 1 | 5 | 9 | 12 | 17 | 3 | 16 | 1 |
| SA31 | k | 36 | 2 | 3 | 14 | 8 | 11 | 2 | 9 | 12 |
| SA51 | f | 2 | 1 | 1 | 1 | 13 | 1 | 1 | 1 | 1 |
| SA53 | k | 55 | 3 | 3 | 8 | 1 | 1 | 3 | 1 | 1 |
| SA72 | k | 38 | 2 | 3 | 18 | 8 | 11 | 2 | 17 | 3 |
| SA12 | c | 50 | 3 | 2 | 10 | 3 | 8 | 3 | 5 | 13 |
| SA13 | c | 18 | 1 | 3 | 20 | 4 | 5 | 5 | 1 | 4 |
| SA14 | c | 53 | 3 | 2 | 15 | 14 | 1 | 11 | 1 | 12 |
| SA15 | e | 41 | 2 | 12 | 5 | 15 | 2 | 3 | 18 | 1 |
| SA16 | e | 28 | 1 | 13 | 1 | 1 | 18 | 3 | 3 | 1 |
| SA17 | c | 60 | 3 | 14 | 1 | 16 | 2 | 2 | 19 | 1 |
| SA18 | c | 32 | 2 | 2 | 4 | 5 | 4 | 5 | 1 | 4 |
| TW295 | k | 80 | 6 | 2 | 5 | 1 | 9 | 4 | 1 | 1 |
| TW871 | k | 79 | 6 | 2 | 1 | 1 | 9 | 5 | 7 | 5 |
| TW964 | f | 91 | 13 | 5 | 21 | 1 | 6 | 4 | 1 | 1 |
| TW1378 | e | 13 | 1 | 2 | 22 | 1 | 19 | 3 | 13 | 1 |
| V1 | c | 63 | 4 | 1 | 1 | 3 | 2 | 3 | 1 | 1 |
| P1 | c | 4 | 1 | 1 | 1 | 13 | 7 | 3 | 11 | 1 |
| OR22P1 | k | 87 | 9 | 8 | 14 | 1 | 12 | 4 | 11 | 1 |