TABLE 3.
Percent conservation of the potential glycosylation sites in HCV envelope protein E2 in the most represented genotypes
| Genotype | na | % Conservation at site:
|
||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 417 (N1) | 423 (N2) | 430 (N3) | 448 (N4) | 476 (N5) | 532 (N6) | 540 (N7) | 556 (N8) | 576 (N9) | 623 (N10) | 645 (N11) | ||
| 1 | 294 | 99.7 | 100 | 98.3 | 98.0 | 39.1 | 97.6 | 98.3 | 99.3 | 98.6 | 99.7 | 99.7 |
| 1a | 77 | 100 | 100 | 98.7 | 98.7 | 97.4 | 90.9 | 100 | 100 | 100 | 100 | 100 |
| 1b | 213 | 99.5 | 100 | 98.1 | 97.7 | 17.8 | 100 | 97.7 | 99.5 | 98.6 | 99.5 | 99.5 |
| 2 | 51 | 100 | 100 | 98.0 | 100 | 88.2 | 100 | 100 | 96.1 | 100 | 100 | 98.0 |
| 2a | 21 | 100 | 100 | 95.2 | 100 | 90.5 | 100 | 100 | 95.2 | 100 | 100 | 100 |
| 2b | 25 | 100 | 100 | 100 | 100 | 92.0 | 100 | 100 | 96.0 | 100 | 100 | 96.0 |
| 3 | 68 | 100 | 98.5 | 100 | 100 | 98.5 | 97.1 | 0 | 86.8 | 98.5 | 98.5 | 100 |
| 3a | 66 | 100 | 98.5 | 100 | 100 | 100 | 97.0 | 0 | 86.4 | 98.5 | 98.5 | 100 |
| 4 | 9 | 100 | 100 | 100 | 100 | 88.9 | 100 | 100 | 100 | 100 | 100 | 100 |
| 4a | 8 | 100 | 100 | 100 | 100 | 87.5 | 100 | 100 | 100 | 100 | 100 | 100 |
| 5 | 2 | 100 | 100 | 100 | 100 | 0 | 100 | 50 | 100 | 100 | 100 | 100 |
| 6 | 27 | 100 | 100 | 96.3 | 100 | 85.2 | 100 | 3.7 | 100 | 96.3 | 100 | 100 |
| 6a | 15 | 100 | 100 | 100 | 100 | 100 | 100 | 0 | 100 | 100 | 100 | 100 |
| Total | 451 | 99.8 | 99.8 | 98.4 | 98.7 | 57.2 | 98.0 | 77.8 | 97.1 | 98.7 | 99.6 | 99.6 |
n, number of sequences.