TABLE 3.
Age (millions of yr) | No. of HERV loci examined | No. of host individuals examined | Mean proportion of full-length proviruses | Rate of recombinational deletion (no. of recombinational deletion events/locus/generation) | Confidence interval for rate of recombinational deletion | Mean proportion of full-length proviruses in simulation | |||
---|---|---|---|---|---|---|---|---|---|
6 to 30 | 25 | 1d | 0.88 | 4.3 × 10−7 | 1.0 × 10−7-1.1 × 10−6 | 0.74 | |||
0.8 to 6 | 66b | 10-19e | 0.14 | 1.5 × 10−5 | 9.5 × 10−6-2.3 × 10−5 | 0.05 | |||
Less than 0.8 | 8c | 10-19e | 0.30 | 8.0 × 10−5 | 1.8 × 10−5-5.6 × 10−4 | 0.33 |
Nine loci from reference 16 plus 57 examined in the present study.
Two loci from reference 16 plus six examined in the present study.
Data from the published human genome sequence.
Samples from 10 or 18 individuals were screened in the study reported in reference 16, and we screened or rescreened a total of 19 samples in the present study.