Table 2.
Marker name | Primers | Amplicon (Contig #: bp coordinates) | DNA fragment sizes (bp) | |
---|---|---|---|---|
Oak Ridge | Mauriceville | |||
1–85-HaeIII | TATTGATCTTCCGCTCTTTGG
AAGAAGGTCGAGTTCCTCGC |
7.6: 213347–213745 | 399 | 67/332 |
1–150-RsaI | CACCGTCCCTAAACTCCATAA
TTGACTGTTCATCTGCCCACT |
7.2: 1385454–1386006 | 553 | 252/301 |
1–184-HaeIII | GGTTATGTAGGAAGGGGGAGA
GGATGACACTGTCGTGGCTAA |
7.2: 315838–316741 | 904 | 320/584 |
3–76-AluI | CAAAGCATGATTGCAAGCCA
ACGGACATAGACAAGGGAAAA |
7.1: 304659–304923 | 130/135 | 265 |
5–55-MspI | ATTCCTCCTTCTCGTCCTCCT
TTGTCTGGTCGAACCATACCT |
7.24: 31028–31473 | 446 | 189/257 |
5–106-TaqI | TACGTTGATGCCGGAAGC
AGAAGGGAATCACCAACTCCA |
7.14: 465795–466056 | 262 | 62/200 |
5–127-Tsp509I | AGCCGAACCAGAAATACAAGA
TGCCGACTCCAAGATCAA |
7.15: 145012–145283 | 272 | 122/150 |
7–2-KpnI | ACTTGATAGCAGCCAAGCTCT
CGAGGAGGAGGAGTCCAAGTA |
7.78: 59602–60075 | 224/250 | 474 |
7–88-HindIII | TGTTTTCCGTGTTCTGGGTT
AGGAGCAAATCCAGGTTCTCA |
7.52: 168261–268752 | 244/248 | 492 |