TABLE 3.
sRNAs affected by lsrR and lsrK
| Protein | Position
|
Flanking gene | Fold changea
|
Condition | ||
|---|---|---|---|---|---|---|
| Start | End | ΔlsrR/WT | ΔlsrK/WT | |||
| DsrA | 2023233 | 2023532 | dsrB/yedP | 3.6 | 4.4 | Confirmed |
| DicF | 1647459 | 1647632 | rzpQ/dicB | 2.0 | 2.5 | Confirmed |
| RydB/tpe7 | 1762411 | 1762957 | sufA (ydiC)/ydiH | 4.9 | Confirmed | |
| IS102 | 2069234 | 2069404 | yeeP/flu | −2.3 | −1.5 | Confirmed |
| Tpke70 | 2494586 | 2496690 | ddg/yfdZ | 2.0 | Confirmed | |
| MicC (ISO63) | 1434918 | 1435283 | ompN/ydbK | 3.2 | Confirmed | |
| AyjiW | 4577468 | 4577637 | Opposite yjiW | 2.5 | 2.1 | Confirmed |
| SokX | 2885243 | 2885600 | 3.5 | Confirmed | ||
| Unknown | 2468480 | 2468778 | yfdI/tfaS | 2.3 | 3.2 | Predicted |
a
WT, wild type.