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. 2007 Jan 18;66(8):1008–1014. doi: 10.1136/ard.2006.063412

Table 2 Ontology analysis of the genes that were expressed at significantly different levels between all 35 patients, or the subgroups consisting of 20 IFNhigh and 15 IFNlow patients, and healthy controls.

All patients IFNhigh IFNlow
Biological process p Value p Value p Value
Immunity and defence 1.61E−11 3.41E−15 NS
Interferon‐mediated immunity 1.09E−06 3.38E−08 NS
Macrophage‐mediated immunity 6.83E−05 1.27E−04 NS
Lipid and fatty acid transport 1.54E−04 NS NS
Transport 4.82E−04 3.33E−02 NS
Cytokine/chemokine‐mediated immunity 1.63E−03 2.61E−05 NS
Ligand‐mediated signalling 3.52E−03 1.92E−02 NS
Cell motility NS 4.24E−03 NS
Blood clotting NS 5.30E−03 NS
Oncogenesis NS 1.04E−02 NS
Cell structure and motility NS 1.55E−02 NS
Inhibition of apoptosis NS 1.66E−02 NS
Signal transduction NS 3.21E−02 NS
Proteolysis NS 3.97E−02 NS

NS, nonsignificant.

Processes with a p value <0.05 were considered significant (with Bonferroni correction).