Table 1.
Pairwise ANOVAs on a per-Gene Basis for Detection of Genotype × Treatment Interactions
| Accession 1 | Accession 2 | Parental Difference | SA Response | Interaction |
|---|---|---|---|---|
| Col-0 | Cvi-1 | 3109 | 1733 | 1013 |
| Col-0 | Est-1 | 2359 | 1744 | 931 |
| Col-0 | Kin-0 | 2238 | 1451 | 730 |
| Col-0 | Mt-0 | 1690 | 1360 | 588 |
| Col-0 | Tsu-1 | 2567 | 1586 | 847 |
| Col-0 | Van-0 | 2481 | 1236 | 642 |
| Cvi-1 | Est-1 | 2869 | 1450 | 857 |
| Cvi-1 | Kin-0 | 3170 | 1274 | 772 |
| Cvi-1 | Mt-0 | 3369 | 1186 | 764 |
| Cvi-1 | Tsu-1 | 2695 | 1282 | 776 |
| Cvi-1 | Van-0 | 3307 | 1141 | 674 |
| Est-1 | Kin-0 | 1970 | 1178 | 632 |
| Est-1 | Mt-0 | 1910 | 1433 | 672 |
| Est-1 | Tsu-1 | 1987 | 1267 | 674 |
| Est-1 | Van-0 | 1846 | 1036 | 524 |
| Kin-0 | Mt-0 | 1440 | 1010 | 448 |
| Kin-0 | Tsu-1 | 1732 | 1046 | 549 |
| Kin-0 | Van-0 | 1640 | 802 | 411 |
| Mt-0 | Tsu-1 | 1934 | 1348 | 764 |
| Mt-0 | Van-0 | 1988 | 1221 | 776 |
| Tsu-1 | Van-0 | 1490 | 833 | 415 |
| Total | 9222 | 3837 | 3620 |
The parental difference column indicates the number of genes showing a difference in expression between the two accessions. The SA response column indicates the number of genes showing an SA response in the pairwise ANOVA comparing the two accessions, either up- or downregulated. The interaction column indicates the number of genes that show a differential SA response between the accessions. These genes are also counted in both the parental difference and SA response columns. Total indicates number of unique genes per column.