Table 2.
Differential Gene-Network Expression in Response to SA Treatment in Seven Arabidopsis Accessions
| Col-0
|
Cvi-1
|
Est
|
Kin-0
|
Mt-0
|
Tsu-1
|
Van-0
|
|||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Network | 4 | 28 | 52 | 4 | 28 | 52 | 4 | 28 | 52 | 4 | 28 | 52 | 4 | 28 | 52 | 4 | 28 | 52 | 4 | 28 | 52 |
| 1000 | Dn | – | – | Dn | – | – | Dn | – | – | Dn | – | – | Dn | – | – | Dn | – | Up | Dn | – | – |
| 1004 | Dn | – | – | Dn | – | – | Dn | – | – | Dn | – | – | Dn | – | – | Dn | – | – | Dn | – | – |
| 1100 | Dn | – | Up | Dn | Up | – | Dn | Up | Up | Dn | – | Up | Dn | – | Up | Dn | – | Up | Dn | – | – |
| 1104 | Dn | – | Up | Dn | – | – | Dn | – | Up | Dn | – | – | Dn | – | Up | Dn | – | – | Dn | – | – |
| 1400 | – | – | Dn | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
| 2000 | Dn | – | Up | – | – | – | – | – | – | Dn | – | – | Dn | – | – | – | – | – | Dn | – | – |
| 2100 | Dn | – | Up | – | – | – | Dn | – | Up | Dn | – | – | Dn | – | – | – | – | – | Dn | – | – |
| 3000 | Dn | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | |||
| 5003 | Up | Dn | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – |
| 7400 | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – | Dn | – | – | – | – | – |
| 740x | Dn | – | – | – | – | – | Dn | – | – | Dn | – | – | – | – | – | Dn | – | – | – | – | – |
| 9000 | Up | – | – | – | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – | – | – | – |
| 9300 | Up | – | – | Up | – | – | Up | – | Dn | Up | – | – | Up | – | – | Up | Up | – | Up | – | – |
| 9400 | Up | – | – | Up | – | – | Up | – | – | Up | – | – | – | – | – | Up | – | – | Up | – | – |
| 9403 | Up | – | – | Up | – | – | Up | – | – | – | – | – | Up | – | – | Up | – | – | Up | – | – |
| a403 | – | – | – | Up | – | – | Up | – | – | – | – | – | Up | – | – | – | – | – | – | – | – |
| b000 | Up | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – |
| b003 | Up | – | – | Up | – | – | Up | – | – | – | – | – | Up | – | – | Up | – | – | Up | – | – |
| b300 | Up | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – |
| b303 | Up | – | – | Up | – | – | Up | – | – | – | – | – | Up | – | – | Up | – | – | Up | – | – |
| b400 | Up | – | – | – | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – | – | – | – |
| b403 | Up | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – | Up | – | – |
| c000 | Up | – | – | – | – | – | Up | – | – | Up | – | – | – | – | – | – | – | – | – | – | – |
| c003 | Up | – | – | – | – | – | Up | – | – | – | – | – | Up | – | – | Up | – | – | – | – | – |
| z100 | Dn | – | – | – | – | – | – | – | – | – | – | – | – | – | – | Dn | – | – | – | – | – |
Cells designated with Dn or Up indicate gene networks with significantly different downregulation and upregulation, respectively, in response to SA treatment as detected by ANOVA for three sample time points (4, 28, and 52 hpt) per accession. The dashes indicate the comparisons for which no statistically significant differences between control and SA treatment were detected.