TABLE 1.

Summary of RMSD values for our test cases

Molecule	Backbone atoms	All buried heavy atoms	All heavy atoms
GpA	0.89	1.30	2.26
KcsA	1.59	1.96	2.42
MscL	1.88	2.57	3.36
(TM1 / TM2)	(1.17 / 2.21)	(1.37 / 3.38)	(1.78 / 4.34)

The second row of MscL gives values for each of the two subsets of helices independently. The higher values for TM2 reflect its screw motion relative to the x-ray structure.