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. 2007 May 11;93(6):1847–1857. doi: 10.1529/biophysj.106.099879

TABLE 1.

List of parameters

Parameter Value Unit
Channel flux coefficient P 6.32 × 106 nm s−1
Single channel radius Rs 6 nm
Pump flux coefficient Pp 40000 nm μM s−1
Pump dissociation coefficient Kd 0.2 μM
Ca2+ concentration in ER, E 700 μM
Ca2+ concentration in cytosol at rest, c0 0.05 μM
Leak flux coefficient Inline graphic 3.36 nm s−1
Diffusion coefficient D of free cytosolic Ca2+ 200 μm2 s−1
Diffusion coefficient Dm of mobile buffer 200 μm2 s−1
Diffusion coefficient Ddye of dye buffer 15.0 μm2 s−1
On-rates of fast buffers:
Inline graphic 50 (μM s)−1
Inline graphic 5 (μM s)−1
Inline graphic 150 (μM s)−1
Dissociation constants of buffers Inline graphic:
Inline graphic 2 μM
Inline graphic 0.15 μM
Inline graphic 2 μM
Total concentrations of buffers:
Bs 80 μM
Bm 300 μM
Bdye 40 μM
Subunit kinetics, note bi = aidi
IP3 binding
a1, a3 80 (μM s)−1
d1 0.008 μM
d3 0.5 μM
Inhibiting, with IP3
a2 0.04 (μM s)−1
d2 12 μM
Inhibiting, without IP3
a4 0.4 (μM s)−1
d4 0.192 μM
Activating
a5 15 (μM s)−1
d5 0.8 μM
Open conformational transition
a0 550 μM
b0 80 μM