Table 5. Species-specific primer sequences*.
Primer | Species | Sequence (5′-3′) |
C1-J-2195 | Universal | TTGATTTTTTGGTCATCCAGAAGT |
TL2-N-3014 | Universal | TCCAATGCACTAATCTGCCATATTA |
C1-J-2287 | -decim | GAATCATTTGGATCATTAGGAATGA |
-cassini | GAATCTTTTGGGTCACTAGGAATAG | |
C1-N-2712 | -decim | AAAGAAGGTTAAATTTACCCCAAT |
-cassini | GAAAAAAGTTAAATTTACTCCAAC | |
C1-N-2787 | -decula | TCTTCTTCCAATAGAAGACATAATA |
-decim | TCTTCTTCCAATAGAAGATACAATG | |
C1-J-2607 | -decula | AGGTGCAGTGTTTGCAATCTTGGGG |
-decim | AGGTGCAGTATTTGCAATTTTAGGA |
differences between the sequences are underlined.