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. 2007 Aug 7;8:292. doi: 10.1186/1471-2105-8-292

Table 1.

Motifs for randomly generated sequences

Seq. # Motif 1 Motif 2 Motif 3 Motif 4 Motif 5 Motif 6
CONS. LYDVAEYAGVSYQTVSRVV FAIVFVVAIA KDKNPRNDRR DYYISPQGKKFRSKPQ VCVHQACYGILKV PSSM

1 LYDVANYAGVNYQTVPRVV YVICFVIQIK GNKDMRAQRQ DYYISPQGKKFRSKPQ -- DAHYVRVNYRF
2 LYDVAEYAGVSYQTVSRTV YSLPYCLTKF KNNFLPEDRK GYYISPHGKKFRSKHQ VCVHQACYGILKV KTFYLGAGYRY
3 LYDVAEYAGVSYQTVSRVV YALGGLIESA NDRSNRGKPW --- VCVHQACYGILKV KAVYAGLGVKF
4 LYDVADYAGVSYQAVSRVV FDAGFVLPAT HGTKSDKTIR --- VCVHQACYGILKV DQVTLGAGMDF
5 LYNVAEYIGVSYNTVSRVV AQIVVCLAGG KEKIPKEVRK --- --- DQYHASAGYKF
6 LYDVAEYAGVSYQTVSRVV FGIVYVLANA KDEDLRNSRR DFYISAQGKKFRSKPQ VCVHQACYGILKV RNWYVRAGYDY
7 LYDVAEYAGVVYQTVSKVV PSMLLFVEIA KDKNNPNQSS -- VCVHQACYGILKV NAVYIGLGVRY
8 LYDVAEYAGVSYQTVSRVV FFVVFSVVIT RQKNAEHDRR -- VCVHQACYGILKV KTYHVGLGFDY
9 LYDVAEYNGISYEVVSRVV DAIIFANNID MEKNLWDERM DYYISPQGKKFRVNPN VCVHQACYGILKV DAYYARAGVDF
10 LYDIAEYAGVSYQTVSRVV FAMVIGVSIG GKKEPRYEQP DYYIWPKGKKFKSKPQ VCVHQACYGILKV PNYHAGLGLRY