Table 2.
Actual and predicted motif begin locations
| SEQ. NUMBER | Motif 1 | Motif 2 | Motif 3 | Motif 4 | Motif 5 | Motif 6 | ||||||||||||
| R | M | G | R | M | G | R | M | G | R | M | G | R | M | G | R | M | G | |
| 1 | 85 | 85 | 85 | 263 | -- | -- | 164 | -- | -- | 33 | 33 | 33 | -- | -- | -- | 215 | 215 | -- |
| 2 | 290 | 290 | 290 | 129 | -- | -- | 106 | -- | -- | 36 | 36 | 36 | 461 | 461 | 464 | 195 | 195 | -- |
| 3 | 332 | 332 | 332 | 286 | -- | -- | 203 | -- | -- | -- | -- | -- | 354 | 354 | 357 | 93 | 93 | -- |
| 4 | 20 | 20 | 20 | 112 | -- | -- | 74 | -- | -- | -- | -- | -- | 378 | 378 | 381 | 239 | 239 | -- |
| 5 | 150 | 150 | 150 | 26 | -- | -- | 133 | -- | -- | -- | -- | -- | -- | -- | -- | 170 | 170 | -- |
| 6 | 187 | 187 | 187 | 17 | -- | -- | 455 | -- | -- | 247 | 247 | 247 | 473 | 473 | 476 | 413 | 291 | -- |
| 7 | 334 | 334 | 334 | 461 | -- | -- | 488 | -- | -- | -- | -- | -- | 394 | 394 | 397 | 80 | 80 | -- |
| 8 | 259 | 259 | 259 | 396 | -- | -- | 163 | -- | -- | -- | -- | -- | 70 | 70 | 73 | 445 | 445 | -- |
| 9 | 197 | 197 | 197 | 330 | -- | -- | 480 | -- | -- | 443 | 443 | 443 | 314 | 314 | 317 | 397 | 397 | -- |
| 10 | 359 | 359 | 359 | 51 | -- | -- | 337 | -- | -- | 108 | 108 | 108 | 31 | 31 | 34 | 141 | 141 | -- |
R: rMotifGen randomly assigned motifs; M: MEME assigned motifs; G: Gibbs Sampler assigned motifs. Each of the start positions have been modified so that each sequence begins at 0, to comply with rMotifGen. Sites incorrectly found are listed in a bold, italic font. This includes the motif 5 positions found by the Gibbs Sampler which are offset by three bases