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. 2007 Aug 28;104(36):14255–14259. doi: 10.1073/pnas.0704208104

Fig. 2.

Fig. 2.

IET spectra of an anthracene thiol junction. Experimental (black) and computed spectra (red) of the anthracene (1) junction. Labels refer to the normal modes of the molecule computed in the absence of metal and numbered from the lowest energy vibration. Further computational details are given in ref. 13 and supporting information (SI) Tables 1 and 2. The observed normal modes belong to two groups: out-of-plane modes that favor the intercommunication between the σ and π tunneling channels and in-plane CInline graphicC stretches that modulate the main π-type tunneling channel. The molecules couple to the electrode through the s orbital of the hydrogen and the pz orbital of the carbon. However, in the first case, only if the CInline graphicH bond bends out of plane can the electron follow the most favorable tunneling path across the molecule.