Table 1.
Dissociation constants and rate data
Protein | Binding site | Kd, pM | kon, M−1·s−1 | koff, s−1 | t1/2, s |
---|---|---|---|---|---|
268//NRE | N | 190 ± 50 | 2.5 ± 0.4 × 107 | 4.7 ± 2.9 × 10−3 | 150 |
268//NRE | Z | 10* | |||
268//NRE | NZ | <1.0† | 2.5 ± 0.2 × 108 | 5.2 ± 0.9 × 10−7 | 1.3 × 106 |
268//NRE | N/Z | <1.0† | 2.5 ± 0.2 × 108 | 9.2 ± 0.7 × 10−7 | 7.5 × 105 |
268//NRE | N//Z | <1.0† | 2.6 ± 0.6 × 108 | 7.7 ± 1.3 × 10−7 | 9.0 × 105 |
NRE | N/Z | 180 ± 43 | >7.3 × 107 | >5.9 × 10−2 | <12 |
Zif268 | NZ | 12 ± 3 | |||
Zif268 | N/Z | 14 ± 4 | >7.0 × 108 | 1.4 ± 0.4 × 10−2 | 39 |
Zif268 | N//Z | 14 ± 1 |
All the constants were determined in at least two separate experiments, and the SEM is indicated.
An exact Kd value could not be determined because this complex gave a smeared band on the gels.
As explained in the text, these Kdvalues could not be measured directly. Estimating Kdfrom the ratio koff/kon gives values of 2.1 fM at the NZ site, 3.7 fM at the N/Z site, and 3.0 fM at the N//Z site.