Table 1.
Selected genes significantly altered under low salinity growth
| Gene ID | Gene name | Former name | COG | Predicted function | Fold change values | log2(x) ratio | Standard deviation of log2(x) ratio |
|---|---|---|---|---|---|---|---|
| 101 | cspD1 | 1278 | cold shock protein | 1.442 | 0.502 | 0.275 | |
| 491 | dnaK | 443 | heat shock protein | -1.307 | -0.376 | 0.172 | |
| 727 | dfr | 534 | DinF-related damage-inducible protein | -2.079 | -1.019 | 0.316 | |
| 1013 | htr13 | 840 | Htr13 transducer | 1.656 | 0.649 | 0.482 | |
| 1121 | aspC2 | 436 | aspartate aminotransferase | 1.694 | 0.688 | 0.453 | |
| 1190 | sod1 | 605 | superoxide dismutase | 1.826 | 0.852 | 0.221 | |
| 1332 | sod2 | 605 | superoxide dismutase | 2.023 | 0.988 | 0.290 | |
| 1408 | ush | 737 | UDP-sugar hydrolase | -1.393 | -0.468 | 0.165 | |
| 1442 | htr12 | 840 | Htr12 transducer | 1.406 | 0.490 | 0.058 | |
| 1632 | cbiQ | 619 | cobalt transport protein | -1.265 | -0.324 | 0.214 | |
| 1634 | cbiN | 1930 | cobalt transport protein | -1.553 | -0.580 | 0.400 | |
| 1691 | rpl23p | 89 | 50S ribosomal protein L23P | -1.454 | -0.533 | 0.138 | |
| 1692 | rpl2p | 90 | 50S ribosomal protein L2P | -1.515 | -0.594 | 0.128 | |
| 1695 | rpl22p | 91 | 50S ribosomal protein L22P | -1.447 | -0.523 | 0.173 | |
| 1698 | rpl29p | 255 | 50S ribosomal protein L29P | -1.460 | -0.535 | 0.176 | |
| 1801 | hsp1 | 71 | small heat shock protein | 2.248 | 1.006 | 0.679 | |
| 1814 | carB | 458 | carbamoyl-phosphate synthase large subunit | -1.590 | -0.646 | 0.261 | |
| 1815 | carA | 505 | carbamoyl-phosphate synthase small subunit | -1.452 | -0.520 | 0.225 | |
| 1924 | trkA6 | 569 | TRK potassium uptake system protein | 2.040 | 1.006 | 0.251 | |
| 2093 | glnA | 174 | glutamine synthatase | -1.719 | -0.766 | 0.212 | |
| 2116 | xup | 2252 | xanthine/uracil permease family protein | -1.603 | -0.647 | 0.307 | |
| 2139 | atpA | 1155 | H+-transporting ATP synthase subunit A | -1.482 | -0.555 | 0.189 | |
| 2140 | atpF | 1436 | H+-transporting ATP synthase subunit F | -1.536 | -0.608 | 0.177 | |
| 2141 | atpC | 1527 | H+-transporting ATP synthase subunit C | -1.637 | -0.694 | 0.221 | |
| 2142 | atpE | 1390 | H+-transporting ATP synthase subunit E | -1.706 | -0.761 | 0.173 | |
| 2143 | atpK | 636 | H+-transporting ATP synthase subunit K | -1.658 | -0.719 | 0.173 | |
| 2144 | atpI | 1269 | H+-transporting ATP synthase subunit I | -1.816 | -0.830 | 0.295 | |
| 2281 | gst | 435 | glutathione S-transferase | 1.508 | 0.573 | 0.235 | |
| 2344 | dppD1 | oppD2 | 444 | oligopeptide ABC transporter | -1.562 | -0.611 | 0.301 |
| 2346 | dppC1 | dppC2 | 1173 | dipeptide ABC transporter permease | -1.436 | -0.488 | 0.307 |
| 2347 | dppB1 | dppB1 | 601 | dipeptide ABC transporter permease | -1.581 | -0.649 | 0.182 |
| 2358 | appA | 747 | oligopeptide binding protein | 1.893 | 0.841 | 0.485 | |
| 2359 | appB | 601 | oligopeptide ABC permease | 1.506 | 0.548 | 0.350 | |
| 2616 | cxp | 2317 | Carboxypeptidase | -2.194 | -1.113 | 0.247 | |
| 5076 | trxA1 | Thioredoxin | -1.424 | -0.491 | 0.235 | ||
| 5142 | tbpC | 2101 | transcription initiation factor IID | 1.748 | 0.743 | 0.430 | |
| 6313 | nhaC3 | 1757 | Na+/H+ antiporter | -1.280 | -0.348 | 0.146 |