Table 4.
Genetic marker panel for cat parentage and identification.
Power of exclusion (PE) (min–max) | ||||||
---|---|---|---|---|---|---|
Marker | Cat Chr. | Nucleotide repeat | Label | Final primer concentration (μM)5 | Breeds | Random-bred |
FCA069 | B4 | AC | VIC | 0.20 | 0.1324–0.5336 | 0.3958–0.5948 |
FCA075 | E2 | TG | NED | 0.10 | 0.1442–0.5771 | 0.4240–0.5992 |
FCA105 | A2 | TG | PET | 0.20 | 0.2221–0.5585 | 0.6110–0.7101 |
FCA1491 | B1 | TG | PET | 0.18 | 0.1783–0.5995 | 0.3586–0.5767 |
FCA220 | F2 | CA | FAM | 0.30 | 0.0000–0.3383 | 0.1851–0.4221 |
FCA229 | A1 | GT | NED | 0.25 | 0.0452–0.5131 | 0.3927–0.5813 |
FCA3101 | C2 | (CA)5TA(CA)7TA(CA)8 | FAM | 0.30 | 0.1196–0.5256 | 0.3417–0.5611 |
FCA4412 | D3 | TAGA | VIC | 0.15 | 0.2061–0.5774 | 0.3388–0.5505 |
FCA6784 | A1 | AC | NED | 0.25 | 0.0415–0.4908 | 0.3016–0.5715 |
AMEL3 | XY | — | N/A | N/A | ||
ZFXY3 | XY | — | PET | 0.20 | N/A | N/A |
Total PE | 0.9008–0.9979 | 0.9947–0.9987 |
Markers that are of the first 10 published feline microsatellites (Menotti-Raymond & O'Brien 1995).
A marker that is currently included in the feline forensic panel (Menotti-Raymond et al. 2005).
The two markers on the X and Y chromosomes were added to the panel after the comparison test (Pilgrim et al. 2005).
Newly designed primers presented herein for FCA678 generate a product 30 bp less than originally published primers.
Forward and reverse primers (Table 2) are used in equal concentrations to make combined concentrations for each marker. Final PCR reaction volumes were 15 μl. The suggested PCR conditions include a 5-min denaturation at 95 °C, followed by 35 cycles of denaturation at 95 °C for 1 min, annealing at 58 °C for 30 s and extension at 72 °C for 30 s, with a final 30-min extension at 72 °C.