Table 3.
Lineage | MYBP
|
|
---|---|---|
Amino acid | 2nd codon position | |
Marsupials plus monotremes, eutherians | 130 ± 9.7 | 143 ± 16.8 |
Marsupials, montremes | 116 ± 9.0 | 126 ± 15.9 |
Myomorph rodents, remaining eutherians | 115 ± 9.0 | 125 ± 15.6 |
Guinea pig, remaining eutherians | 98 ± 7.9 | 103 ± 13.4 |
Primates, ferungulates | 95 ± 7.3 | 101 ± 12.2 |
Wallaroo, opossum | 75 ± 7.1 | 76 ± 11.8 |
Datings were based on ML distances of amino acids according to the mtREV-22 matrix, and ML distances of the 2nd codon positions based on the TN model of sequence evolution (63) with the parameters of the model estimated from the data set by the puzzle program (transition/transversion parameter = 1.60 and purine transition/pyrimidine transition parameter = 1.66). As a calibration point, the artiodactyl/cetacean divergence set at 60 MYBP (A/C-60) was applied. The 95% confidence intervals were estimated according to Possion expectations of numbers of amino acid or nucleotide substitutions. The phylogenetic analysis generally joined the rabbit and the ferungulates. With that topology the dating of the divergence between the rabbit and the ferungulates is tentatively given at ≈90 MYBP.