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. 2007 Aug 20;8:301. doi: 10.1186/1471-2105-8-301

Table 1.

Databases used. Summary of databases mentioned in this analysis

Database Description nsSNPs used for this study Availability
dbSNP Database of Single Nucleotide Polymorphisms 21471 [8]
OMIM Online database of Mendelian Inherited dimorphisms in Man 2256 [15]
HapMap Database quantifying frequencies of common haplotypes in four populations 5770 [3]
HGMD Human Gene Mutation Database of mutations within the coding regions, splicing and regulatory regions of human genes causing inherited disease N/A [12]
GAD Genetic association database of medically relevant polymorphisms identified in published scientific papers N/A [13]
HGVBase Human Genome Variation Database N/A [6]
LS-SNP Database of large scale annotation of predicted effects of human SNPs. 11220 [24]
Polyphen Database of predicted functional effect of human nsSNPs 4459 [27]
HOMSTRAD Database of protein structures classified by protein family N/A [40]