Table 1.
Database | Description | nsSNPs used for this study | Availability |
dbSNP | Database of Single Nucleotide Polymorphisms | 21471 | [8] |
OMIM | Online database of Mendelian Inherited dimorphisms in Man | 2256 | [15] |
HapMap | Database quantifying frequencies of common haplotypes in four populations | 5770 | [3] |
HGMD | Human Gene Mutation Database of mutations within the coding regions, splicing and regulatory regions of human genes causing inherited disease | N/A | [12] |
GAD | Genetic association database of medically relevant polymorphisms identified in published scientific papers | N/A | [13] |
HGVBase | Human Genome Variation Database | N/A | [6] |
LS-SNP | Database of large scale annotation of predicted effects of human SNPs. | 11220 | [24] |
Polyphen | Database of predicted functional effect of human nsSNPs | 4459 | [27] |
HOMSTRAD | Database of protein structures classified by protein family | N/A | [40] |