. Author manuscript; available in PMC: 2007 Sep 19.

Published in final edited form as: AIDS Res Hum Retroviruses. 2006 Oct;22(10):968–978. doi: 10.1089/aid.2006.22.968

TABLE 3.

Estimates of Genetic Diversity (θ_W) and Population Recombination Rate (ρ)^a

	θ_W	ρ
Strain A_T1–9	0.039	81^***
Strain A_T1	0.021	20^***
Strain A_T2	0.025	58^***
Strain A_T3	0.021	75^***
Strain A_T4	0.019	3^***
Strain A_T5	0.009	0^***
Strain A_T6	0.008	0^***
Strain A_T7	0.003	0^***
Strain A_T8	0.007	0^***
Strain A_T9	0.009	0^***
Strain A_T1–2	0.028	67^***
Strain B_T1–2	0.011	2^***
Strain B_T1	0.009	1^***
Strain B_T2	0.004	0^***

The probability of ρ = θ (indicated by asterisks) from the LPT test is also indicated. Sequences 060302P83 and 060302P85 were excluded from the analysis because they contained many gaps.

^**

p < 0.01;

^***

p < 0.001.