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. Author manuscript; available in PMC: 2007 Sep 21.
Published in final edited form as: J Comput Chem. 2005 Dec;26(16):1668–1688. doi: 10.1002/jcc.20290

Figure 11.

Figure 11

Projection qm of 104 snapshots onto the two-dimensional subspace spanned by the first (m = 1) and second (m = 2) effective modes (a). Probability distribution functions Pm(qm) for the first (b) and second (c) effective mode, respectively, where Pm(qm)dqm represents the probability that the projection is at position qm.