Table 1.
Apo AnsA | Complexed
|
||
---|---|---|---|
Native AnsA | AnsA[T162A] | ||
APOM | CNATM | CT162A | |
Data Collectiona | |||
Space group | P21 | P21 | P21 |
Cell dimensions | |||
a, b, c (Å) | 57.8, 151.6, 87.1 | 90.3, 89.8, 93.1 | 90.5, 89.8, 93.3 |
α, β, γ (°) | 90.0, 88.6, 90.0 | 90.0, 117.0, 90.0 | 90.0, 117.1, 90.0 |
Beamline | ID22, SER-CAT | ID22, SER-CAT | BM22, SER-CAT |
Resolution range(Å) | 50.0-1.88 (1.93-1.88) | 50.0-1.90 (1.97-1.90) | 50.0-1.82 (1.89-1.82) |
Wavelength(Å) | 1.01259 | 1.01259 | 0.97923 |
No. of reflections | |||
Measured | 468,621 | 338,886 | 377,415 |
Unique | 116,888 | 95,017 | 119,400 |
Rsym(%)b | 8.0 (31.0) | 8.4 (24.6) | 8.0 (29.8) |
Completeness(%) | 96.2 (85.8) | 90.6 (81.3) | 99.7 (98.8) |
Redundancy | 4.0 (3.6) | 3.6 (3.2) | 3.2 (2.5) |
I/σ(I) | 18.2 (4.4) | 17.9 (5.0) | 15.7 (2.4) |
Refinement | |||
Resolution range(Å) | 50.0-1.89 | 50.0-1.90 | 50.0-1.82 |
No. of reflection(F>0σ(F)) | 115,353 | 89,743 | 115,053 |
Rwork(%)c | 18.4 | 22.3 | 20.9 |
Rfree(%)d | 20.7 | 26.4 | 22.6 |
No. of atoms | |||
Protein | 10,200 | 9,589 | 10,013 |
Ligand/ion | 72 | 159 | 136 |
Water | 561 | 575 | 515 |
Average B factors(Å2) | |||
Protein | 27 | 20 | 26 |
Ligand | 39 | 15 | 22 |
Water | 37 | 24 | 32 |
Root mean square deviations from ideal values | |||
Bond lengths(Å) | 0.007 | 0.013 | 0.005 |
Bond angles(degrees) | 1.5 | 1.4 | 1.4 |
Residues from Ramachandran plot | |||
Most favored(%) | 92.2 | 92.1 | 91.3 |
Additional allowed(%) | 7.4 | 7.4 | 7.9 |
Generously allowed(%) | 0.4 | 0.5 | 0.7 |
Contents of structure e | |||
Chain A | 2–280, 287–337 | 3–17, 40–279, 288–336 | 3–19, 25–280, 286–336 |
Chain B | 3–280, 287–337 | −4–13, 28–280, 288–337 | −5–19, 28–280, 287–337 |
Chain C | 2–280, 286–337 | 3–13, 34–280, 288–336 | 3–18, 25–280, 286–337 |
Chain D | 1–280, 287–337 | −5–13, 30–279, 288–336 | −5–19, 25–280, 288–337 |
PDB code | 2P2D | 2P2N | 2HIM |
Highest resolution shell is shown in parenthesis.
Rsym = Σ|(I−<I>)|IΣ(I), where I is the observed intensity.
Rwork = Σ||Fobs|−|Fcalc|| / Σ|Fobs|, where Fobs and Fcalc are observed and calculated structure factors.
Rfree is the R value obtained for a test set of reflections consisting of randomly selected 5% subset of the data set excluded from refinement.
Residues with negative numbers derive from the 6 × His tag.