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. Author manuscript; available in PMC: 2007 Sep 24.
Published in final edited form as: J Mol Biol. 2007 Mar 30;369(3):794–811. doi: 10.1016/j.jmb.2007.03.061

Table 1.

Data Refinement and Statistics

Apo AnsA Complexed
Native AnsA AnsA[T162A]

APOM CNATM CT162A
Data Collectiona
 Space group P21 P21 P21
 Cell dimensions
  a, b, c (Å) 57.8, 151.6, 87.1 90.3, 89.8, 93.1 90.5, 89.8, 93.3
  α, β, γ (°) 90.0, 88.6, 90.0 90.0, 117.0, 90.0 90.0, 117.1, 90.0
 Beamline ID22, SER-CAT ID22, SER-CAT BM22, SER-CAT
 Resolution range(Å) 50.0-1.88 (1.93-1.88) 50.0-1.90 (1.97-1.90) 50.0-1.82 (1.89-1.82)
 Wavelength(Å) 1.01259 1.01259 0.97923
 No. of reflections
  Measured 468,621 338,886 377,415
  Unique 116,888 95,017 119,400
 Rsym(%)b 8.0 (31.0) 8.4 (24.6) 8.0 (29.8)
 Completeness(%) 96.2 (85.8) 90.6 (81.3) 99.7 (98.8)
 Redundancy 4.0 (3.6) 3.6 (3.2) 3.2 (2.5)
 I/σ(I) 18.2 (4.4) 17.9 (5.0) 15.7 (2.4)
Refinement
 Resolution range(Å) 50.0-1.89 50.0-1.90 50.0-1.82
 No. of reflection(F>0σ(F)) 115,353 89,743 115,053
 Rwork(%)c 18.4 22.3 20.9
 Rfree(%)d 20.7 26.4 22.6
 No. of atoms
  Protein 10,200 9,589 10,013
  Ligand/ion 72 159 136
  Water 561 575 515
 Average B factors(Å2)
  Protein 27 20 26
  Ligand 39 15 22
  Water 37 24 32
 Root mean square deviations from ideal values
  Bond lengths(Å) 0.007 0.013 0.005
  Bond angles(degrees) 1.5 1.4 1.4
 Residues from Ramachandran plot
  Most favored(%) 92.2 92.1 91.3
  Additional allowed(%) 7.4 7.4 7.9
  Generously allowed(%) 0.4 0.5 0.7
 Contents of structure e
  Chain A 2–280, 287–337 3–17, 40–279, 288–336 3–19, 25–280, 286–336
  Chain B 3–280, 287–337 −4–13, 28–280, 288–337 −5–19, 28–280, 287–337
  Chain C 2–280, 286–337 3–13, 34–280, 288–336 3–18, 25–280, 286–337
  Chain D 1–280, 287–337 −5–13, 30–279, 288–336 −5–19, 25–280, 288–337
 PDB code 2P2D 2P2N 2HIM
a

Highest resolution shell is shown in parenthesis.

b

Rsym = Σ|(I−<I>)|IΣ(I), where I is the observed intensity.

c

Rwork = Σ||Fobs|−|Fcalc|| / Σ|Fobs|, where Fobs and Fcalc are observed and calculated structure factors.

d

Rfree is the R value obtained for a test set of reflections consisting of randomly selected 5% subset of the data set excluded from refinement.

e

Residues with negative numbers derive from the 6 × His tag.