Skip to main content
. Author manuscript; available in PMC: 2007 Sep 26.
Published in final edited form as: Metab Eng. 2006 Sep 17;9(1):68–86. doi: 10.1016/j.ymben.2006.09.001

Table 10.

Complete list of EMUs generated for the simulation model of glucose from EMU network decomposition of the gluconeogenesis pathway. The mass isotopomer distribution of glucose, including all carbon, hydrogen, and oxygen atoms was simulated. This required only 493 EMUs (354 EMUs in the reduced model). In comparison 2,637,120 isotopomers/cumomers would have been required to describe this system.

Full EMU model
Reduced EMU model
EMU size No. EMUs in subnetwork EMU size No. EMUs in subnetwork
1 11, 8 1 8, 5
2 12, 11, 9 2 9, 8, 6
3 11, 11, 11, 10, 9 3 8, 8, 8, 7, 6
4 12, 11, 11, 11, 9, 9, 9, 6, 1 4 9, 8, 8, 8, 6, 6, 6, 4, 1
5 12, 12, 11, 10, 9, 9, 9, 9, 5, 6, 1, 1, 1 5 9, 9, 8, 7, 6, 6, 6, 6, 4, 4, 1, 1, 1
6 12, 10, 10, 10, 10, 9, 9, 9, 5, 1, 1 6 9, 8, 7, 7, 7, 6, 6, 6, 4, 1, 1
7 11, 10, 10, 10, 9, 8 7 9, 7, 7, 7, 6, 6
8 10, 9, 8 8 7, 7, 6
9 9, 5 9 7, 3
10 5 10 3
11 none 11 none
12 none 12 none
13 6 13 4
14 none 14 none
15 none 15 none
16 none 16 none
17 5 17 4
18 5, 4 18 4, 4
19 6 19 4

Total number of EMUs = 493 Total number of EMUs = 354