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. 2007 Sep 19;8(Suppl 1):S1. doi: 10.1186/1471-2350-8-S1-S1

Table 5.

Associations achieving nominal genome wide significance, p < 5*10-8 across the 17 phenotype working groups

Phenotype working group/manuscript Trait SNP rs ID* Chr Physical location (bp) GEE P-value FBAT P-value IN/NEAR gene
Select biomarkers [33] Monocyte chemoattractant protein-1 rs2494250 1 156,091,324 1.0*10-14 3.5*10-8 FCER1A, OR10J3
Monocyte chemoattractant protein-1 rs4128725 1 156,219,032 3.7*10-12 3.3*10-8 OR10J1
C-reactive protein average exams 2,6,7 rs2794520 1 156,491,889 2.8*10-8 4.3*10-5 CRP
C-reactive protein average exams 2,6,7 rs2808629 1 156,489,869 3.2*10-8 4.8*10-5 CRP
Kidney/Endocrine [42] Cystatin C rs1158167 20 23,526,189 8.5*10-09 0.006 CST9L|CST9|CST3
Diabetes [38] 28-year mean fasting plasma glucose rs2722425 8 40,603,396 2.0*10-8 0.005 ZMAT4
Sleep and circadian [26] Epworth sleepiness scale rs1823068 5 58,711,806 2.5*10-8 0.069 PDE4D
Neurology [37] Total Cerebral Brain Volume (ATCBV) rs1970546 20 59287333 4.0*10-8 0.005 CDH4
Hemostatic factors [34] Factor VII rs561241 13 112,808,035 4.5*10-16 3.4*10-4 F7

The following phenotype working groups did not have any traits achieving nominal genome-wide significance: echocardiography, flow-mediated dilation and exercise tolerance testing; blood pressure and tonometry; subclinical cardiovascular disease; cardiovascular outcomes; cancer; electrocardiography and heart rate variability; pulmonary function testing; aging; bone; lipids; obesity