Table 2 Summary of the properties of the 32 key genes (44 probe sets).
Gene* | Score† | Mean ratio‡ | p Value§ | Common | Genbank | UniGene |
---|---|---|---|---|---|---|
20026 | 1 | 1.6 | 9.40E‐03 | Sarcoglycan, delta (35 kda dystrophin‐associated glycoprotein) | AA234982 | Hs.387207 |
20194 | 1 | 0.22 | 4.30E‐07 | Ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin) | T80232 | Hs.190977 |
21453 | 1 | 0.26 | 4.30E‐07 | Ectonucleotide pyrophosphatase/phosphodiesterase 2 (autotaxin) | AA476508 | Hs.190977 |
21223 | 0.88 | 0.28 | 3.50E‐03 | AA775616 | Data not found | |
20672 | 0.85 | 1.5 | 1.10E‐02 | v‐kit hardy‐zuckerman 4 feline sarcoma viral oncogene homolog | N24824 | Hs.479754 |
10064 | 0.78 | 2 | 2.20E‐02 | v‐rel reticuloendotheliosis viral oncogene homolog b, nuclear factor of kappa light polypeptide gene enhancer in b‐cells 3 (avian) | AA258001 | Hs.307905 |
18012 | 0.78 | 2.2 | 2.10E‐04 | T63324 | Data not found | |
21141 | 0.78 | 2.4 | 6.40E‐03 | Apolipoprotein d | AA456975 | Hs.522555 |
13460 | 0.77 | 2 | 3.50E‐04 | Major histocompatibility complex, class ii, dr beta 4 | AA630549 | Hs.534322 |
20835 | 0.77 | 2.2 | 1.20E‐03 | Major histocompatibility complex, class i, a | AA644657 | Hs.181244 |
22167 | 0.7 | 3.6 | 2.40E‐03 | Serum/glucocorticoid regulated kinase | AA486082 | Hs.296323 |
20383 | 0.63 | 2 | 4.70E‐04 | Major histocompatibility complex, class ii, dp beta 1 | AA486627 | Hs.485130 |
20697 | 0.62 | 2 | 1.50E‐03 | Major histocompatibility complex, class ii, dr beta 4 | W88967 | Hs.534322 |
13282 | 0.6 | 2.1 | 2.20E‐03 | Phospholipase a2, group iia (platelets, synovial fluid) | T61323 | Hs.466804 |
20266 | 0.58 | 1.9 | 2.40E‐03 | Chemokine (c‐c motif) ligand 14 | R96668 | Hs.272493 |
20834 | 0.58 | 2.1 | 9.80E‐04 | Major histocompatibility complex, class ii, dr beta 4 | AA664195 | Hs.520049 |
20980 | 0.58 | 2.1 | 1.50E‐04 | Major histocompatibility complex, class ii, dp alpha 1 | AA634028 | Hs.347270 |
20258 | 0.55 | 1.8 | 5.10E‐03 | Major histocompatibility complex, class ii, dr alpha | R47979 | Hs.520048 |
21313 | 0.55 | 2 | 2.40E‐03 | Major histocompatibility complex, class ii, dr beta 6 (pseudogene) | H50623 | Hs.545653 |
20804 | 0.5 | 1.5 | 1.70E‐02 | H26426 | Data not found | |
13089 | 0.43 | 2 | 6.00E‐04 | Growth differentiation factor 10 | R52085 | Hs.2171 |
20828 | 0.43 | 0.51 | 1.20E‐02 | Microfibrillar‐associated protein 2 | N67487 | Hs.389137 |
10161 | 0.42 | 1.8 | 2.00E‐02 | abl interactor 2 | N21334 | Hs.471156 |
21955 | 0.42 | 1.9 | 4.70E‐04 | Microsomal glutathione s‐transferase 2 | W73474 | Hs.81874 |
13525 | 0.38 | 1.8 | 9.40E‐03 | Procollagen‐proline, 2‐oxoglutarate 4‐dioxygenase (proline 4‐hydroxylase), alpha polypeptide i | AA457671 | Hs.500047 |
21888 | 0.33 | 2.6 | 3.60E‐04 | Inositol 1,4,5‐triphosphate receptor, type 2 | R68021 | Hs.512235 |
18020 | 0.32 | 1.8 | 8.90E‐03 | Major histocompatibility complex, class i, a | AA644657 | Hs.181244 |
22181 | 0.32 | 1.4 | 1.60E‐02 | grb2‐associated binding protein 1 | R96595 | Hs.80720 |
21553 | 0.3 | 1.4 | 2.40E‐02 | Tumour necrosis factor, alpha‐induced protein 2 | W33183 | Hs.525607 |
22288 | 0.3 | 1.5 | 1.20E‐02 | Matrix metalloproteinase 7 (matrilysin, uterine) | AA031513 | Hs.2256 |
22318 | 0.28 | 1.6 | 1.50E‐02 | Cadherin 1, type 1, e‐cadherin (epithelial) | H97778 | Hs.461086 |
18030 | 0.27 | 2 | 6.20E‐03 | Homo sapiens, clone image: 5575764, mRNA | W60701 | Hs.519978 |
20784 | 0.27 | 0.51 | 1.20E‐02 | Tissue inhibitor of metalloproteinase 3 (sorsby fundus dystrophy, pseudoinflammatory) | AA099153 | Hs.297324 |
21105 | 0.27 | 0.42 | 1.30E‐05 | Similar to ribosomal protein l18a; 60s ribosomal protein l18a | W81118 | Hs.517776 |
22532 | 0.25 | 0.51 | 9.40E‐03 | Tissue inhibitor of metalloproteinase 3 (sorsby fundus dystrophy, pseudoinflammatory) | AA479202 | Hs.297324 |
13243 | 0.23 | 0.52 | 1.50E‐02 | Tissue inhibitor of metalloproteinase 3 (sorsby fundus dystrophy, pseudoinflammatory) | AA479202 | Hs.297324 |
20723 | 0.23 | 1.4 | 1.70E‐02 | AA455270 | Data not found | |
21887 | 0.23 | 1.3 | 2.10E‐02 | rab2, member ras oncogene family | T82415 | Hs.369017 |
22206 | 0.23 | 2.6 | 1.20E‐03 | Macrophage stimulating, pseudogene 9 | T51539 | Hs.475654 |
22253 | 0.23 | 1.4 | 2.90E‐03 | rab2, member ras oncogene family | R38260 | Hs.369017 |
20934 | 0.22 | 1.4 | 2.70E‐02 | Nuclear factor of activated t‐cells, cytoplasmic, calcineurin‐dependent 1 | AA679278 | Hs.534074 |
21025 | 0.22 | 0.44 | 5.40E‐05 | Zinc finger protein 9 (a cellular retroviral nucleic acid binding protein) | AA625995 | Hs.518249 |
21119 | 0.22 | 2.2 | 4.00E‐03 | Homo sapiens, clone image: 5575764, mRNA | W60701 | Hs.519978 |
21372 | 0.22 | 1.9 | 3.50E‐04 | cug triplet repeat, RNA binding protein 2 | T84491 | Hs.309288 |
*Gene number used in the array data.
†The average selection rate.
‡The ratio between the means of the two molecular classes.
§p Value from the Wilcoxon rank sum test on the two molecular classes.
All other columns are from the original data provided. Genes 20194 and 21453, which correspond to one unique gene alone, can classify the molecular classes detected using all the data.