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. 2007 Aug;19(8):2349–2369. doi: 10.1105/tpc.107.051037

Table 2.

Number of RXLR Candidate Effectors Identified in Each Genome

Species Reference Genome Size (Mb) Total RXLRa RXLR + EERb HMMc
P. ramorum Tyler et al. (2006) 65 531 214 181
P. sojae Tyler et al. (2006) 95 672 189 158
H. parasitica Washington University 75 149 42 19
Total 1352 445 358
a

Total number of candidate RXLR effectors predicted by the presence of a signal peptide and the RXLR sequence at amino acids 30 to 60.

b

Number of candidates with RXLR and EER sequences.

c

Number of candidates identified using a HMM for the RXLR-EER domain based on an alignment of the control set shown in Table 1 (see Figure 1B).